Proceedings of the National Academy of Sciences

Vol. 122, Issue 14 Issue 14 2025
81
Articles

Articles in this Issue

Unveiling Cas8 dynamics and regulation within a transposon-encoded Cascade–TniQ complex

Amun C. Patel, Souvik Sinha, Pablo R. Arantes et al. Apr 08, 2025 10.1073/pnas.2422895122

The Vibrio cholerae Cascade–TniQ complex unveiled a new paradigm in biology, demonstrating that CRISPR-associated proteins can direct DNA transposition. Despite...

Structural basis for neutralizing antibody binding to pertussis toxin

Jory A. Goldsmith, Annalee W. Nguyen, Rebecca E. Wilen et al. Apr 08, 2025 10.1073/pnas.2419457122

Pertussis toxin (PT) is a key protective antigen in vaccine- and natural immunity-mediated protection from Bordetella pertussis infection. Despite its importanc...

Digital phenotyping using smartphones could help steer mental health treatment

David Adam Apr 08, 2025 10.1073/pnas.2505700122

DDX54 downregulation enhances anti-PD1 therapy in immune-desert lung tumors with high tumor mutational burden

Jeong-Ryeol Gong, Jungeun Lee, Younghyun Han et al. Apr 08, 2025 10.1073/pnas.2412310122

High tumor mutational burden (TMB-H) is a predictive biomarker for the responsiveness of cancer to immune checkpoint inhibitor (ICI) therapy that indicates whether immune cells can sufficiently recogn...

Phosphatidylinositol 4,5-bisphosphate activation mechanism of human KCNQ5

Zhenni Yang, Yueming Zheng, Demin Ma et al. Apr 08, 2025 10.1073/pnas.2416738122

The human voltage-gated potassium channels KCNQ2, KCNQ3, and KCNQ5 can form homo- and heterotetrameric channels that are responsible for generating the neuronal M current and maintaining the membrane...

Nuclear Galectin-1 promotes <i>KRAS</i> -dependent activation of pancreatic cancer stellate cells

Judith Vinaixa, Neus Martínez-Bosch, Joan Gibert et al. Apr 08, 2025 10.1073/pnas.2424051122

Pancreatic ductal adenocarcinoma (PDAC) is one of the most aggressive cancers, primarily due to its complex tumor microenvironment (TME), which drives both disease progression and therapy resistance....

A conserved ARF–DNA interface underlies auxin-triggered transcriptional response

Juriaan Rienstra, Vanessa Polet Carrillo-Carrasco, Martijn de Roij et al. Apr 08, 2025 10.1073/pnas.2501915122

Auxin Response Factor (ARF) plant transcription factors are the key effectors in auxin signaling. Their DNA-Binding Domain (DBD) contains a B3 domain that allows base-specific interactions with Auxin...

Phenotypic changes of auditory nerve fibers after excitotoxicity

Artem Diuba, Paul Gratias, Penelope W. C. Jeffers et al. Apr 08, 2025 10.1073/pnas.2412332122

There is a substantial body of evidence elucidating the pathophysiological aspects of excitotoxicity in the mammalian cochlea. However, the question of whether the resultant damage is reversible remai...

Reply to Falkingham et al.: Trackway shows flap-running in feathered dinosaurs

T. Alexander Dececchi, Kyung Soo Kim, Martin G. Lockley et al. Apr 08, 2025 10.1073/pnas.2501832122

Reply to Brown et al.: Significant sex differences in accelerated cortical thinning associated with the COVID-19 lockdowns

Neva M. Corrigan, Ariel Rokem, Patricia K. Kuhl Apr 08, 2025 10.1073/pnas.2426640122

Lenacapavir disrupts HIV-1 core integrity while stabilizing the capsid lattice

Chenglei Li, Ryan C. Burdick, Rokeya Siddiqui et al. Apr 08, 2025 10.1073/pnas.2420497122

Lenacapavir (GS-6207; LEN) is a potent HIV-1 capsid inhibitor approved for treating multidrug-resistant infection. LEN binds to a hydrophobic pocket between neighboring capsid (CA) proteins in hexamer...

Lung B cells in ectopic germinal centers undergo affinity maturation

Stephane M. Guillaume, William S. Foster, Isabel San Martín Molina et al. Apr 08, 2025 10.1073/pnas.2416855122

The lungs are constantly exposed to the external environment and a myriad of antigenic challenges within the air. Chronic exposure to allergens and other airborne antigens can result in the formation...

Reconfigurable homochiral colloidal clusters assembled under orthogonally applied electric and magnetic fields

Xingrui Zhu, Yuanxing Zhang, Benjamin L. Hanson et al. Apr 08, 2025 10.1073/pnas.2418006122

Chiral structures assembled from colloids are of great interest for applications in metamaterials and micromachines. However, similar to their molecular counterparts, these assemblies often result in...

The cingulate cortex facilitates auditory perception under challenging listening conditions

Kelsey L. Anbuhl, Marielisa Diez Castro, Nikki A. Lee et al. Apr 08, 2025 10.1073/pnas.2412453122

We often exert greater cognitive resources (i.e., listening effort) to understand speech under challenging acoustic conditions. This mechanism can be overwhelmed in those with hearing loss, resulting...

No compelling evidence of sex differences in brain maturation during COVID-19 lockdowns when the sexes are compared statistically

Andrew W. Brown, Simon Chung, Timothy Koscik et al. Apr 08, 2025 10.1073/pnas.2421462122

<i>LMX1B</i> missense-perturbation of regulatory element footprints disrupts serotonergic forebrain axon arborization

Brent Eastman, Nobuko Tabuchi, Xinrui L. Zhang et al. Apr 08, 2025 10.1073/pnas.2411716122

Pathogenic coding mutations are prevalent in human neuronal transcription factors (TFs) but how they disrupt development is poorly understood. Lmx1b is a master transcriptional regulator of postmitoti...

Quirks of track preservation and formation are more likely than pre-avian flight and ultrafast dinosaurs

Peter L. Falkingham, Jens N. Lallensack Apr 08, 2025 10.1073/pnas.2500877122

Reactivation of memory-associated neurons induces downstream suppression of competing neuronal populations

Jacob F. Norman, Bahar Rahsepar, Anna Vena et al. Apr 08, 2025 10.1073/pnas.2410101122

Inducing apparent memory recall by tagging and optogenetically reactivating cells in the hippocampus was demonstrated over a decade ago. However, the hippocampal dynamics resulting from this reactivat...

Design of a halogen bond catalyzed DNA endonuclease

Margaret G. Walker, Cesar Gustavo Mendez, Alexander N. Ho et al. Apr 08, 2025 10.1073/pnas.2500099122

In this study, we expand the repertoire of biological catalysts by showing that a halogen bond (X-bond) can functionally replace the magnesium (Mg 2+ ) cofactor...

Prolonged signaling of backbone-modified glucagon‐like peptide‐ <b>1</b> analogues with diverse receptor trafficking

Brian P. Cary, Marlies V. Hager, Zamara Mariam et al. Apr 08, 2025 10.1073/pnas.2407574122

Signal duration and subcellular location are emerging as important facets of G protein–coupled receptor (GPCR) function. The glucagon-like peptide-1 receptor (GLP-1R), a clinically relevant class B1 G...

The TRPV3 channel is a mediator of zinc influx and homeostasis in murine oocytes

Emily M. Lopes, Hiroki Akizawa, Oguz C. Koc et al. Apr 08, 2025 10.1073/pnas.2420194122

Zinc (Zn 2+ ) homeostasis is essential for gametogenesis and reproduction, and its deficiency causes infertility. Oocytes contain higher Zn...

Following phospholipid transfer through the OmpF <sub>3</sub> –MlaA–MlaC lipid shuttle with native mass spectrometry

Carla Kirschbaum, Jack L. Bennett, Qiaoyu Tian et al. Apr 08, 2025 10.1073/pnas.2420041122

The maintenance of lipid asymmetry (Mla) system in gram-negative bacteria transfers phospholipids between the outer and inner membrane to maintain the outer membrane asymmetry. Misplaced phospholipids...

Signaling networks in cancer stromal senescent cells establish malignant microenvironment

Yue Zhang, Teh-Wei Wang, Maho Tamatani et al. Apr 08, 2025 10.1073/pnas.2412818122

The tumor microenvironment (TME) encompasses various cell types, blood and lymphatic vessels, and noncellular constituents like extracellular matrix (ECM) and cytokines. These intricate interactions b...

PHLPP2 is a pseudophosphatase that lost activity in the metazoan ancestor

Tarik Husremović, Vanessa Meier, Lucas Piëch et al. Apr 08, 2025 10.1073/pnas.2417218122

The phosphoinositide 3-kinase (PI3K) pathway is a major regulator of cell and organismal growth. Consequently, hyperactivation of PI3K and its downstream effector kinase, Akt, is observed in many huma...

Childhood muscle growth: Reference curves for lower leg muscle volumes and their clinical application in cerebral palsy

Bart Bolsterlee, Brian V. Y. Chow, Jonathan Yu et al. Apr 08, 2025 10.1073/pnas.2416660122

Skeletal muscles grow substantially during childhood. However, quantitative information about the size of typically developing children’s muscles is sparse. Here, the objective was to construct muscle...

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Journal Info

Publisher National Academy of Sciences
ISSN 0027-8424
E-ISSN 1091-6490
Subject Life Sciences
Language English
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