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<i>Bacillus subtilis</i> Utilizes Decarboxylated <i>S</i>-Adenosylmethionine for the Biosynthesis of Tandem Aminopropylated Microcin C, a Potent Inhibitor of Bacterial Aspartyl-tRNA Synthetase

Journal of the American Chemical Society Alexey Kulikovsky, Eldar Yagmurov, Anastasiia Grigoreva et al. Apr 09, 2025 DOI: 10.1021/jacs.4c18468

Spatial mechanisms of quality control during chaperone-mediated assembly of the proteasome

Nature Communications Eshita Das, Linh Le, Vladyslava Sokolova et al. Apr 09, 2025 DOI: 10.1038/s41467-025-58703-8

Retraction: Harnessing the power of AI: Advanced deep learning models optimization for accurate SARS-CoV-2 forecasting

PLoS ONE Apr 09, 2025 DOI: 10.1371/journal.pone.0321233

Association between clonal hematopoiesis and periodontitis: a two-sample mendelian randomization study

Scientific Reports Feng Qiu, Wei Shao, Xue Qin et al. Apr 09, 2025 DOI: 10.1038/s41598-025-87040-5

The Role of Protons in CO<sub>2</sub> Reduction on Gold under Acidic Conditions

Journal of the American Chemical Society Weixing Wu, Ying Wang Apr 09, 2025 DOI: 10.1021/jacs.5c01149

Ceftazidime-avibactam use selects multidrug-resistance and prevents designing collateral sensitivity-based therapies against Pseudomonas aeruginosa

Nature Communications Sara Hernando-Amado, María A. Gomis-Font, José R. Valverde et al. Apr 09, 2025 DOI: 10.1038/s41467-025-58597-6

Retraction: Applying Internet information technology combined with deep learning to tourism collaborative recommendation system

PLoS ONE Apr 09, 2025 DOI: 10.1371/journal.pone.0321330

Hybrid convolutional neural network and bi-LSTM model with EfficientNet-B0 for high-accuracy breast cancer detection and classification

Scientific Reports Umesh Kumar Lilhore, Yogesh Kumar Sharma, Brajesh Kumar Shukla et al. Apr 09, 2025 DOI: 10.1038/s41598-025-95311-4

A Fresh Twist on the Phospha-(Aza)-Wittig Reaction

Journal of the American Chemical Society Chenyang Hu, Maren Pink, Jose M. Goicoechea Apr 09, 2025 DOI: 10.1021/jacs.5c02865

The regulatory architecture of the primed pluripotent cell state

Nature Communications Bo I. Li, Mariano J. Alvarez, Hui Zhao et al. Apr 09, 2025 DOI: 10.1038/s41467-025-57894-4

Gender and medication use in Turkey: Evidence from a general population survey

PLoS ONE Tekin Kose Apr 09, 2025 DOI: 10.1371/journal.pone.0321590

Gender differences in health behaviors and outcomes were commonly documented by researchers. The focus of this study was the analysis of gender differences in medication use for a general population in Turkey. It also explored a range of factors associated with medication use at the individual level. A nationally representative cross-sectional data set was obtained from the 2019 wave of the Turkish Health Survey. The sample of this study included 17,083 adults residing in different regions of Turkey. Conditional mixed-process regression models were estimated for the whole sample and subsamples by gender. The rates of prescribed and non-prescribed medication use were 40.7% and 30.2%, respectively, in the adult population of Turkey. There were significant gender differences in medication use in the Turkish case. Females were 19.4% more likely to use prescribed medication, and they were 30.8% more likely to use non-prescribed medication compared to males in Turkey. There were negative associations between prescribed and non-prescribed medication use. On average, females were 9.2% less likely to report higher levels of health status, and they were 18.4% more likely to use healthcare services. Individuals with higher levels of self-rated health status were less likely to use prescribed medication. Both prescribed and non-prescribed medication use were positively related to healthcare service use. Complementing the earlier literature, the results of the present study demonstrated that gender-specific designs should be considered by health policies on the use of medications.

Research on water body information extraction and monitoring in high water table mining areas based on Google Earth Engine

Scientific Reports Anya Zhong, Zhen Wang, Yulong Gen Apr 09, 2025 DOI: 10.1038/s41598-025-97018-y

Motivation on Intramolecular Through-Space Charge Transfer for the Realization of Thermally Activated Delayed Fluorescence (TADF)–Thermally Stimulated Delayed Phosphorescence (TSDP) in C^C^N Gold(III) Complexes and Their Applications in Organic Light-Emitting Devices

Journal of the American Chemical Society Panpan Li, Ziyong Chen, Ming-Yi Leung et al. Apr 09, 2025 DOI: 10.1021/jacs.5c00121

D-orbital Reconstruction Achieves Low Charge Overpotential in Li-oxygen Batteries

Nature Communications Yin Zhou, Kun Yin, Yingying Huang et al. Apr 09, 2025 DOI: 10.1038/s41467-025-58640-6

Retraction: Ecopolitical discourse: Authoritarianism or democracy? — Evidence from China

PLoS ONE Apr 09, 2025 DOI: 10.1371/journal.pone.0321414

Phenotypic variability of plant architecture, easy destemming, and yield for accelerated selection for mechanical harvestability in chile pepper

Scientific Reports Ehtisham S. Khokhar, Dennis N. Lozada, Muhammad Ibrar Khan et al. Apr 09, 2025 DOI: 10.1038/s41598-025-94819-z

Synthesis of Electron-Deficient BisAzaCoroneneDiimide-Conjugated Polymers by Light-Locking Dynamic Covalent Bonds

Journal of the American Chemical Society Adèle Gapin, Elarbi Chatir, Olivier Alévêque et al. Apr 09, 2025 DOI: 10.1021/jacs.5c01351

DNA supercoiling-mediated G4/R-loop formation tunes transcription by controlling the access of RNA polymerase

Nature Communications Jihee Hwang, Chun-Ying Lee, Sumitabha Brahmachari et al. Apr 09, 2025 DOI: 10.1038/s41467-025-58479-x

Abstract RNA polymerase (RNAP) is a processive motor that modulates DNA supercoiling and reshapes DNA structures. The feedback loop between the DNA topology and transcription remains elusive. Here, we investigate the impact of potential G-quadruplex forming sequences (PQS) on transcription in response to DNA supercoiling. We find that supercoiled DNA increases transcription frequency 10-fold higher than relaxed DNA, which lead to an abrupt formation of G-quadruplex (G4) and R-loop structures. Moreover, the stable R-loop relieves topological strain, facilitated by G4 formation. The cooperative formation of G4/R-loop effectively alters the DNA topology around the promoter and suppresses transcriptional activity by impeding RNAP loading. These findings highlight negative supercoiling as a built-in spring that triggers a transcriptional burst followed by a rapid suppression upon G4/R-loop formation. This study sheds light on the intricate interplay between DNA topology and structural change in transcriptional regulation, with implications for understanding gene expression dynamics.

Multiplexed cytokine profiling identifies diagnostic signatures for latent tuberculosis and reactivation risk stratification

PLoS ONE Krista Meserve, Cole A. Chapman, Mingrui Xu et al. Apr 09, 2025 DOI: 10.1371/journal.pone.0316648

Active tuberculosis (TB) is caused by Mycobacterium tuberculosis (Mtb) bacteria and is characterized by multiple phases of infection, leading to difficulty in diagnosing and treating infected individuals. Patients with latent tuberculosis infection (LTBI) can reactivate to the active phase of infection following perturbation of the dynamic bacterial and immunological equilibrium, which can potentially lead to further Mtb transmission. However, current diagnostics often lack specificity for LTBI and do not inform on TB reactivation risk. We hypothesized that immune profiling readily available QuantiFERON-TB Gold Plus (QFT) plasma supernatant samples could improve LTBI diagnostics and infer risk of TB reactivation. We applied a whispering gallery mode, silicon photonic microring resonator biosensor platform to simultaneously quantify thirteen host proteins in QFT-stimulated plasma samples. Using machine learning algorithms, the biomarker concentrations were used to classify patients into relevant clinical bins for LTBI diagnosis or TB reactivation risk based on clinical evaluation at the time of sample collection. We report accuracies of over 90% for stratifying LTBI + from LTBI– patients and accuracies reaching over 80% for classifying LTBI + patients as being at high or low risk of reactivation. Our results suggest a strong reliance on a subset of biomarkers from the multiplexed assay, specifically IP-10 for LTBI classification and IL-10 and IL-2 for TB reactivation risk assessment. Taken together, this work introduces a 45-minute, multiplexed biomarker assay into the current TB diagnostic workflow and provides a single method capable of classifying patients by LTBI status and TB reactivation risk, which has the potential to improve diagnostic evaluations, personalize treatment and management plans, and optimize targeted preventive strategies in Mtb infections.

Olfactory epithelium electrical stimulation mitigates memory and synaptic deficits caused by mechanical ventilation

Scientific Reports Sepideh Ghazvineh, Morteza Mooziri, Alireza Salimi et al. Apr 09, 2025 DOI: 10.1038/s41598-025-96661-9