Browse Articles

Discover research articles across all indexed journals

Enlarging moment and regulating orientation of buried interfacial dipole for efficient inverted perovskite solar cells

Nature Communications Yang Peng, Yu Chen, Jing Zhou et al. Feb 01, 2025 DOI: 10.1038/s41467-024-55653-5

Predicting climate-change impacts on the global glacier-fed stream microbiome

Nature Communications Massimo Bourquin, Hannes Peter, Grégoire Michoud et al. Feb 01, 2025 DOI: 10.1038/s41467-025-56426-4

Machine learning assisted composition design of high-entropy Pb-free relaxors with giant energy-storage

Nature Communications Xingcheng Wang, Ji Zhang, Xingshuai Ma et al. Feb 01, 2025 DOI: 10.1038/s41467-025-56443-3

Abstract The high-entropy strategy has emerged as a prevalent approach to boost capacitive energy-storage performance of relaxors for advanced electrical and electronic systems. However, exploring high-performance high-entropy systems poses challenges due to the extensive compositional space. Herein, with the assistance of machine learning screening, we demonstrated a high energy-storage density of 20.7 J cm-3 with a high efficiency of 86% in a high-entropy Pb-free relaxor ceramic. A random forest regression model with key descriptors based on limited reported experimental data were developed to predict and screen the elements and chemical compositions of high-entropy systems. Following basic experiments, a (Bi0.5Na0.5)TiO3-based high-entropy relaxor characterized by fine grains, weakly-coupled and small-sized polar clusters was identified. This resulted in a near-linear polarization behavior and an ultrahigh breakdown strength of 95 kV mm-1. Further, this high-entropy realxor presented a high discharge energy density of 7.7 J cm-3 under discharge rate of about 27 ns, along with superior temperature and fatigue stability. Our results present the data-driven model for efficiently exploring high-performance high-entropy relaxors, demonstrating the potential of machine learning in developing relaxors.

Propensity score matching analysis of valve-sparing versus aortic root replacement in type A aortic dissection patients

Nature Communications Ling Chen, Yichao Pan, Huaijian Zhang et al. Feb 01, 2025 DOI: 10.1038/s41467-025-56509-2

Allogeneic CD33-directed CAR-NKT cells for the treatment of bone marrow-resident myeloid malignancies

Nature Communications Yan-Ruide Li, Ying Fang, Siyue Niu et al. Feb 01, 2025 DOI: 10.1038/s41467-025-56270-6

Abstract Chimeric antigen receptor (CAR)-engineered T cell therapy holds promise for treating myeloid malignancies, but challenges remain in bone marrow (BM) infiltration and targeting BM-resident malignant cells. Current autologous CAR-T therapies also face manufacturing and patient selection issues, underscoring the need for off-the-shelf products. In this study, we characterize primary patient samples and identify a unique therapeutic opportunity for CAR-engineered invariant natural killer T (CAR-NKT) cells. Using stem cell gene engineering and a clinically guided culture method, we generate allogeneic CD33-directed CAR-NKT cells with high yield, purity, and robustness. In preclinical mouse models, CAR-NKT cells exhibit strong BM homing and effectively target BM-resident malignant blast cells, including CD33-low/negative leukemia stem and progenitor cells. Furthermore, CAR-NKT cells synergize with hypomethylating agents, enhancing tumor-killing efficacy. These cells also show minimal off-tumor toxicity, reduced graft-versus-host disease and cytokine release syndrome risks, and resistance to allorejection, highlighting their substantial therapeutic potential for treating myeloid malignancies.

Electrosynthesis of NH3 from NO with ampere-level current density in a pressurized electrolyzer

Nature Communications Wenqiang Yang, Huan Liu, Xiaoxia Chang et al. Feb 01, 2025 DOI: 10.1038/s41467-025-56548-9

Observation of minimal and maximal speed limits for few and many-body states

Nature Communications Zitian Zhu, Lei Gao, Zehang Bao et al. Feb 01, 2025 DOI: 10.1038/s41467-025-56451-3

Effective in vivo binding energy landscape illustrates kinetic stability of RBPJ-DNA binding

Nature Communications Duyen Huynh, Philipp Hoffmeister, Tobias Friedrich et al. Feb 01, 2025 DOI: 10.1038/s41467-025-56515-4

Abstract Transcription factors (TFs) such as RBPJ in Notch signaling bind to specific DNA sequences to regulate transcription. How TF-DNA binding kinetics and cofactor interactions modulate gene regulation is mostly unknown. We determine the binding kinetics, transcriptional activity, and genome-wide chromatin occupation of RBPJ and mutant variants by live-cell single-molecule tracking, reporter assays, and ChIP-Seq. Importantly, the search time of RBPJ exceeds its residence time, indicating kinetic rather than thermodynamic binding stability. Impaired RBPJ-DNA binding as in Adams-Oliver-Syndrome affect both target site association and dissociation, while impaired cofactor binding mainly alters association and unspecific binding. Moreover, our data point to the possibility that cofactor binding contributes to target site specificity. Findings for other TFs comparable to RBPJ indicate that kinetic rather than thermodynamic DNA binding stability might prevail in vivo. We propose an effective in vivo binding energy landscape of TF-DNA interactions as instructive visualization of binding kinetics and mutation-induced changes.

A universal and wide-range cytosine base editor via domain-inlaid and fidelity-optimized CRISPR-FrCas9

Nature Communications Lan Hu, Jing Han, Hao-Da Wang et al. Feb 01, 2025 DOI: 10.1038/s41467-025-56655-7

Distal protein-protein interactions contribute to nirmatrelvir resistance

Nature Communications Eric M. Lewandowski, Xiujun Zhang, Haozhou Tan et al. Feb 01, 2025 DOI: 10.1038/s41467-025-56651-x

Layer ensemble averaging for fault tolerance in memristive neural networks

Nature Communications Osama Yousuf, Brian D. Hoskins, Karthick Ramu et al. Feb 01, 2025 DOI: 10.1038/s41467-025-56319-6

Advances in lignocellulosic feedstocks for bioenergy and bioproducts

Nature Communications Daniel B. Sulis, Nathalie Lavoine, Heike Sederoff et al. Feb 01, 2025 DOI: 10.1038/s41467-025-56472-y

Bidirectional relationship between epigenetic age and stroke, dementia, and late-life depression

Nature Communications Cyprien A. Rivier, Natalia Szejko, Daniela Renedo et al. Feb 01, 2025 DOI: 10.1038/s41467-024-54721-0

INSTINCT: Multi-sample integration of spatial chromatin accessibility sequencing data via stochastic domain translation

Nature Communications Yuyao Liu, Zhen Li, Xiaoyang Chen et al. Feb 01, 2025 DOI: 10.1038/s41467-025-56535-0

KAI2-dependent signaling controls vegetative reproduction in Marchantia polymorpha through activation of LOG-mediated cytokinin synthesis

Nature Communications Aino Komatsu, Mizuki Fujibayashi, Kazato Kumagai et al. Feb 01, 2025 DOI: 10.1038/s41467-024-55728-3

Rapid learning with phase-change memory-based in-memory computing through learning-to-learn

Nature Communications Thomas Ortner, Horst Petschenig, Athanasios Vasilopoulos et al. Feb 01, 2025 DOI: 10.1038/s41467-025-56345-4

Abstract There is a growing demand for low-power, autonomously learning artificial intelligence (AI) systems that can be applied at the edge and rapidly adapt to the specific situation at deployment site. However, current AI models struggle in such scenarios, often requiring extensive fine-tuning, computational resources, and data. In contrast, humans can effortlessly adjust to new tasks by transferring knowledge from related ones. The concept of learning-to-learn (L2L) mimics this process and enables AI models to rapidly adapt with only little computational effort and data. In-memory computing neuromorphic hardware (NMHW) is inspired by the brain’s operating principles and mimics its physical co-location of memory and compute. In this work, we pair L2L with in-memory computing NMHW based on phase-change memory devices to build efficient AI models that can rapidly adapt to new tasks. We demonstrate the versatility of our approach in two scenarios: a convolutional neural network performing image classification and a biologically-inspired spiking neural network generating motor commands for a real robotic arm. Both models rapidly learn with few parameter updates. Deployed on the NMHW, they perform on-par with their software equivalents. Moreover, meta-training of these models can be performed in software with high-precision, alleviating the need for accurate hardware models.

Spatial integration of multi-omics single-cell data with SIMO

Nature Communications Penghui Yang, Kaiyu Jin, Yue Yao et al. Feb 01, 2025 DOI: 10.1038/s41467-025-56523-4

An atlas of metabolites driving chemotaxis in prokaryotes

Nature Communications Maéva Brunet, Shady A. Amin, Iurii Bodachivskyi et al. Feb 01, 2025 DOI: 10.1038/s41467-025-56410-y

Copy number amplification of FLAD1 promotes the progression of triple-negative breast cancer through lipid metabolism

Nature Communications Xiao-Qing Song, Tian-Jian Yu, Yang Ou-Yang et al. Feb 01, 2025 DOI: 10.1038/s41467-025-56458-w

Vaccine-induced T cell receptor T cell therapy targeting a glioblastoma stemness antigen

Nature Communications Yu-Chan Chih, Amelie C. Dietsch, Philipp Koopmann et al. Feb 01, 2025 DOI: 10.1038/s41467-025-56547-w

Abstract T cell receptor-engineered T cells (TCR-T) could be advantageous in glioblastoma by allowing safe and ubiquitous targeting of the glioblastoma-derived peptidome. Protein tyrosine phosphatase receptor type Z1 (PTPRZ1), is a clinically targetable glioblastoma antigen associated with glioblastoma cell stemness. Here, we identify a therapeutic HLA-A*02-restricted PTPRZ1-reactive TCR retrieved from a vaccinated glioblastoma patient. Single-cell sequencing of primary brain tumors shows PTPRZ1 overexpression in malignant cells, especially in glioblastoma stem cells (GSCs) and astrocyte-like cells. The validated vaccine-induced TCR recognizes the endogenously processed antigen without off-target cross-reactivity. PTPRZ1-specific TCR-T (PTPRZ1-TCR-T) kill target cells antigen-specifically, and in murine experimental brain tumors, their combined intravenous and intracerebroventricular administration is efficacious. PTPRZ1-TCR-T maintain stem cell memory phenotype in vitro and in vivo and lyse all examined HLA-A*02 + primary glioblastoma cell lines with a preference for GSCs and astrocyte-like cells. In summary, we demonstrate the proof of principle to employ TCR-T to treat glioblastoma.