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Discover research articles across all indexed journals

Elucidating ligand interactions and small-molecule activation in the pyrrolnitrin biosynthetic enzyme PrnB

Journal of Biological Chemistry Bingnan Li, Remigio Usai, Jackson Campbell et al. Feb 01, 2025 DOI: 10.1016/j.jbc.2024.108123

VO2 based polarization-independent dual-wavelength plasmonic switches using U and C shaped nanostructures

Scientific Reports Kirti Dalal, Yashna Sharma Feb 01, 2025 DOI: 10.1038/s41598-025-85349-9

PTEN loss in glioma cell lines leads to increased extracellular vesicle biogenesis and PD-L1 cargo in a PI3K-dependent manner

Journal of Biological Chemistry Julio C. Sanchez, Timothy M. Pierpont, Dariana Argueta-Zamora et al. Feb 01, 2025 DOI: 10.1016/j.jbc.2024.108143

Temporal variations of metals and trace elements in tuna spines from the canary islands from 1990s to 2000s

Scientific Reports Eunice Vásquez-Domínguez, Enrique Lozano-Bilbao, Pedro J. Pascual Alayón et al. Feb 01, 2025 DOI: 10.1038/s41598-025-87116-2

Mutations in histones dysregulate copper homeostasis leading to defect in Sec61-dependent protein translocation mechanism in Saccharomyces cerevisiae

Journal of Biological Chemistry Santoshi Acharjee, Rajshree Pal, Smriti Anand et al. Feb 01, 2025 DOI: 10.1016/j.jbc.2025.108163

Vaccines for cancer prevention: exploring opportunities and navigating challenges

Nature Reviews Drug Discovery Michele Graciotti, Lana E. Kandalaft Feb 01, 2025 DOI: 10.1038/s41573-024-01081-5

High-Precision computational solutions for nonlinear evolution models in graphene sheets

Scientific Reports Mostafa M. A. Khater, Suleman H. Alfalqi, Aleksander Vokhmintsev Feb 01, 2025 DOI: 10.1038/s41598-025-85263-0

Abstract This study investigates the analytical solutions of a nonlinear evolution model governing the dynamics of graphene sheets, a material renowned for its exceptional electronic properties and versatile applications in nanotechnology. Three advanced analytical approaches-the Khater II (Khat II) method, the Khater III (Khat III) method, and the Generalized Rational (GRat) approach-are employed to derive exact solutions for this model with high precision. The accuracy and reliability of these solutions are validated by comparing them to numerical results obtained via He’s Variational Iteration (HVI) method, which serves as a benchmark for numerical verification. The analysis reveals a remarkable agreement between the analytical and numerical solutions, highlighting the robustness and effectiveness of the proposed methodologies. Furthermore, this study provides new insights into the nonlinear dynamics and physical properties of graphene sheets, while also identifying connections to other prominent nonlinear evolution equations. The innovative use of these analytical techniques offers practical frameworks for addressing complex nonlinear models in mathematical physics, thus advancing solution methodologies for such equations. This research contributes significantly to applied mathematics, material science, and nanotechnology by delivering accurate solutions and enhancing our understanding of graphene’s nonlinear behavior. Finally, the findings have far-reaching implications, offering potential applications in designing advanced materials with tailored properties to support technological advancements, thereby pushing the boundaries of nanotechnology and materials engineering.

Enhanced dynamic coupling in a nuclear receptor underlies ligand activity

Journal of Biological Chemistry Tracy Yu, Priscilla Villalona, Sabab Hasan Khan et al. Feb 01, 2025 DOI: 10.1016/j.jbc.2024.108081

Antiviral target compound profile for pandemic preparedness

Nature Reviews Drug Discovery James F. Demarest, Ruxandra Draghia-Akli, Tomas Cihlar et al. Feb 01, 2025 DOI: 10.1038/s41573-024-01102-3

Enhancing safety in surface mine blasting operations with IoT based ground vibration monitoring and prediction system integrated with machine learning

Scientific Reports Mangalpady Aruna, Harsha Vardhan, Abhishek Kumar Tripathi et al. Feb 01, 2025 DOI: 10.1038/s41598-025-86827-w

mTOR signaling controls protein aggregation during heat stress and cellular aging in a translation- and Hsf1-independent manner

Journal of Biological Chemistry Arthur Fischbach, Per O. Widlund, Xinxin Hao et al. Feb 01, 2025 DOI: 10.1016/j.jbc.2025.108172

Nutritional and anti-nutritional evaluation of injera made from Sorghum, Rice, Teff, and Flaxseed flours using D-optimal mixture design

Scientific Reports Moges Amtataw, Estifanos Kassahun, Solomon Tibebu et al. Feb 01, 2025 DOI: 10.1038/s41598-025-88407-4

Histone N-tails modulate sequence-specific positioning of nucleosomes

Journal of Biological Chemistry Tatiana Nikitina, Wilfried M. Guiblet, Feng Cui et al. Feb 01, 2025 DOI: 10.1016/j.jbc.2024.108138

Comprehensive analysis reveals the tumor suppressor role of macrophage signature gene FCER1G in hepatocellular carcinoma

Scientific Reports Deyu Kong, Yiping Zhang, Linxin Jiang et al. Feb 01, 2025 DOI: 10.1038/s41598-025-88071-8

Discovery of a tribenzophenazine analog for binding to the KRAS mRNA G-quadruplex structures in the cisplatin-resistant non–small cell lung cancer

Journal of Biological Chemistry Xiao-Dong Wang, Jia-Hong Lin, Ming-Hao Hu Feb 01, 2025 DOI: 10.1016/j.jbc.2025.108164

Exploring potential biomarkers for acute myocardial infarction by combining circadian rhythm gene expression and immune cell infiltration

Scientific Reports Xiao Yu, Xiaopeng Zhang, Hazrat Bilal et al. Feb 01, 2025 DOI: 10.1038/s41598-025-88568-2

Abstract Current diagnostic biomarkers for acute myocardial infarction (AMI), such as troponins, often lack specificity, leading to false positives under non-cardiac conditions. Recent studies have implicated circadian rhythm and immune infiltration in the pathogenesis of AMI. This study hypothesizes that analyzing the interplay between circadian rhythm-related gene expression and immune infiltration identify highly specific diagnostic biomarkers for AMI. Our results demonstrated differential expression of 15 circadian rhythm-related genes (CRGs) between AMI patients and healthy individuals, with five key genes—JUN, NAMPT, S100A8, SERPINA1, and VCAN identified as key contributors to this process. Functional enrichment analyses suggest these genes significantly influence cytokine and chemokine production in immune responses. Immune infiltration assessments using ssGSEA indicated elevated levels of neutrophils, macrophages, and eosinophils in AMI patients. Additionally, we identified potential therapeutic implications with 13 pivotal miRNAs and 10 candidate drugs targeting these genes. The Benjamini–Hochberg method was employed to adjust for multiple testing, and the results retained statistical significance. RT-qPCR analysis further confirmed the upregulation of these five genes under hypoxic conditions, compared to controls. Collectively, our findings highlight the critical role of CRGs in AMI, providing a foundation for improved diagnostic approaches and novel therapeutic targets.

Human microRNA miR-197-3p positively regulates HIV-1 virion infectivity through its target DDX52 by stabilizing Vif protein expression

Journal of Biological Chemistry Anindita Dasgupta, Anjali Tripathi, Alapani Mitra et al. Feb 01, 2025 DOI: 10.1016/j.jbc.2025.108198

Predicted missing information biases ensemble perception of temporally ordered facial expressions

Scientific Reports Jiahao Lu, Jun Wang Feb 01, 2025 DOI: 10.1038/s41598-025-87936-2

Interplay of chromatin remodeling BAF complexes in mouse embryonic and epiblast stem cell conversion and maintenance

Journal of Biological Chemistry Zhaoru Ma, Shuping Tan, Renhong Lu et al. Feb 01, 2025 DOI: 10.1016/j.jbc.2024.108140

Spatial-domain combination of GRACE monthly time-variable gravity models based on multiple weighting strategies and comparison of models’ performance in the Caspian Sea

Scientific Reports Wei You, Ke Qian, Xiangyu Wan et al. Feb 01, 2025 DOI: 10.1038/s41598-025-87922-8