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Mechanisms of USP18 specificity toward ISG15 revealed by paralog sequence analysis comparison

Journal of Biological Chemistry Thomas Bonacci, Derek L. Bolhuis, Nicholas G. Brown et al. Jul 01, 2025 DOI: 10.1016/j.jbc.2025.110288

Ecological properties of soil improved by high–performance ester materials under freeze–thaw cycles conditions

PLoS ONE Cuiying Zhou, Qingxiu Zhang, Jin Liao et al. Jul 01, 2025 DOI: 10.1371/journal.pone.0327417

High-performance ester materials (HPEMs) are widely applied in slope soil restoration owing to their biodegradability, with a predictable degradation cycle of 2–3 years. Although HPEMs have been extensively studied for tropical applications, their performance in cold regions subject to frequent freeze-thaw cycles (FTCs) remains poorly understood. We hypothesize that FTCs degrade HPEM performance but enhance plant germination. Controlled experiments demonstrated that FTCs reduced material viscosity by 70.5% and water absorption by 52%, while increasing germination rates by 30%, revealing a trade-off between material durability and ecological benefits. Additionally, the field water holding capacity and soil conductivity of the improved soil decrease. Based on these experimental results, the study establishes quantitative relationships between FTCs and soil ecological properties improved by HPEMs. Quantitative relationships revealed linear viscosity decline and exponential water absorption decay trends, with high correlation coefficients (R² ≥ 0.95). This study establishes a comprehensive theoretical framework for predicting the service life of ester materials in cold regions and optimizing their application strategies.

Long-term prognosis of punctate inner choroidopathy lesions in pathologic myopia and their relationship to lacquer cracks

Scientific Reports Kaori Sayanagi, Masaki Suzue, Satoko Fujimoto et al. Jul 01, 2025 DOI: 10.1038/s41598-025-06165-9

Evolution and driving mechanisms of eco-environmental quality across different urbanization stages

Scientific Reports Zhenfang He, Qingchun Guo, Zhaoxin Yin et al. Jul 01, 2025 DOI: 10.1038/s41598-025-06084-9

Reliability modeling framework of satellite constellation based on three-parameter interval grey number Lz transformation

Scientific Reports Ruirui Shao, Weiqing You, Yuanyuan Nie Jul 01, 2025 DOI: 10.1038/s41598-025-07789-7

Dynamical network markers for heterogeneous hierarchical networks

Scientific Reports Yuto Saito, Hampei Sasahara, Jun-ichi Imura Jul 01, 2025 DOI: 10.1038/s41598-025-08338-y

Optimization of Pyrocatechol and p-Cresol adsorption onto a composite of Chitosan and polyacrylamide incorporated with zeolitic imidazolate Framework-8

Scientific Reports Chou-Yi Hsu, Ebraheem Abdu Musad Saleh, M. M. Moharam et al. Jul 01, 2025 DOI: 10.1038/s41598-025-07613-2

Assessing etiological classification systems and their relationship with neurological deterioration in patients with intracerebral hemorrhage

Scientific Reports Daniel Vázquez-Justes, Gerard Mauri-Capdevila, Yhovany Gallego et al. Jul 01, 2025 DOI: 10.1038/s41598-025-07506-4

Clinical and immunopathological evaluation and its comparison with IHC consensus molecular subtypes of colorectal cancer

Scientific Reports Eduardo Feliciangeli, Ana Albaladejo-González, José García-Rodríguez et al. Jul 01, 2025 DOI: 10.1038/s41598-025-04962-w

Abstract This study examined the prognostic significance of immunoscore within consensus molecular subtypes (CMS), tumour budding (TB), and macrophage infiltration in colorectal cancer (CRC). A retrospective series was analysed using immunohistochemical staining, immunoscore evaluation, and CMS classification, according to established methods. Among the 255 patients with CRC, 34.9% had stage III disease. The CMS classification showed a predominance of CMS2/3 (69.4%), with relapse occurring across all the subtypes. Low immunoscore was frequent in conventional and serrated adenocarcinomas, as well as in CMS2/3, whereas MSI-H correlated with intermediate-high immunoscore. TB was prevalent in relapsed patients, particularly in CMS2/3 and CMS4, and was linked to serrated histology. TB of ≥ 20 foci was correlated with hepatic metastases. CD163+ macrophage infiltration was common in CMS1 and CMS2/3, and was associated with high immune scores. TB influenced overall and relapse-free survival, whereas CMS affected the overall survival. Immunoscore were not associated with survival. The associations identified between CMS subtypes and clinical as well as pathological characteristics enhance the understanding of CMS behaviour in clinical practice.

A porphyrin-based COF to reduce CO2 and nitrite in situ for photoelectrochemical catalysis synthesis of urea

Scientific Reports Yi Liu, Zijian Zeng, Ruizhi Peng et al. Jul 01, 2025 DOI: 10.1038/s41598-025-03944-2

Lysophospholipid stereoisomers exert distinct GPR55-mediated functions via different Gα subunits

Journal of Biological Chemistry Adam T. Guy, Yuta Kohro, Koki Kano et al. Jul 01, 2025 DOI: 10.1016/j.jbc.2025.110324

Association between 2D landing biomechanics, isokinetic muscle strength and asymmetry in females using novel, task specific metrics based on ACL injury mechanisms

PLoS ONE Chelsea Oxendale, Grace Smith Jul 01, 2025 DOI: 10.1371/journal.pone.0326882

This study investigated the relationship between isokinetic muscle strength metrics, landing biomechanics, and their asymmetries, in females. Twenty-three female team sport athletes completed unilateral forward drop landings, and isokinetic muscle strength assessment of the knee extensors and flexors, on both limbs. Discrete two-dimensional kinematics of the trunk, hip, knee, and ankle in the sagittal and frontal plane and peak GRF were recorded during the drop landings. Novel, task-specific isokinetic strength metrics related to the landing task, such as peak concentric and eccentric torque, angle specific torque (AST), functional range and traditional/functional ratios were quantified. Asymmetry for kinematic and muscle strength data were quantified based on the individual variability of the task and the population mean and smallest worthwhile change. Functional concentric flexor range explained 15–18% of the variance in peak frontal trunk (P = 0.003) and hip motion (P = 0.007) and 22% in peak frontal knee motion (P = 0.005), when combined with the functional flexion ratio. Peak eccentric extensor torque explained 13–14% of the variance in peak sagittal hip (P = 0.014) and knee (P = 0.009) motion. Asymmetry in concentric extensor AST explained 28% of the variance in peak knee frontal plane asymmetry (P = 0.010), however the direction of asymmetry was rarely present on the same side for kinematic and strength variables. Novel and task specific isokinetic strength metrics explained small but significant variances in sagittal and frontal plane landing kinematics and asymmetry, which have previously been related to ACL injury risk.

Weather patterns forecast the severity of cervical spinal cord injuries

Scientific Reports Robert J. Quon, Josh Feler, Ziqi Wang et al. Jul 01, 2025 DOI: 10.1038/s41598-025-03465-y

Evaluation of Glyoxal fixation for immunohistochemistry of the retina

Scientific Reports Glyn Chidlow, John P.M. Wood, Weng Onn Chan et al. Jul 01, 2025 DOI: 10.1038/s41598-025-04226-7

Abstract Immunohistochemistry has become an essential tool in retinal research. Formaldehyde is the gold standard fixative, but the development of an improved fixative is of keen interest. Herein, we performed a comprehensive evaluation of the compatibility of glyoxal fixation with retinal immunohistochemistry, using wholemounts, cryosections and paraffin-embedded eyes. Immunohistochemistry was performed in normal rat eyes, and, to facilitate localisation of stress-response proteins, eyes subjected to laser-induced retinal injury or injected with the endotoxin lipopolysaccharide. Regarding wholemounts, glyoxal fixation produced retinas that were too fragile to be consistently dissected as pristine wholemounts. In terms of antigenicity, we observed no consistent improvement when glyoxal fixation was used. Some antibodies produced higher signal intensities, but a greater number displayed weaker signal-to-background patterns of labelling compared to formaldehyde fixation. For cryosections and paraffin sections, we likewise found no compelling evidence that immunohistochemical signals were intensified when formaldehyde was replaced by glyoxal. For the 50 antibodies tested, formaldehyde typically produced signal-to-background immunolabelling that was equivalent or superior to glyoxal. In conclusion, the results of this study do not support the use of glyoxal fixation for immunohistochemistry of the rat retina, but with the caveat that improved formulations and protocols may address the limitations exposed herein.

Morphometric analysis of peripheral nerves in people with spinal cord injury

Scientific Reports Aurora Messina, Mary P. Galea Jul 01, 2025 DOI: 10.1038/s41598-025-07809-6

Family history of non-communicable diseases and the risk of cardiovascular-kidney-metabolic syndrome

Scientific Reports Hyeseung Lee, Jinyoung Jeong, Yesol Yim et al. Jul 01, 2025 DOI: 10.1038/s41598-025-07316-8

Contributions of the multiple demand network to emergent and skilled reading

Scientific Reports Anna Chrabaszcz, Kailee Lear, Corrine Durisko et al. Jul 01, 2025 DOI: 10.1038/s41598-025-05756-w

An advanced fire detection system for assisting visually challenged people using recurrent neural network and sea-horse optimizer algorithm

Scientific Reports Fahd N. Al-Wesabi, Abeer A. K. Alharbi, Ishfaq Yaseen Jul 01, 2025 DOI: 10.1038/s41598-025-91829-9

Abstract The developing elderly population undergoes a high level of eyesight and mental impairment, which frequently results in a defeat of independence. That kind of person should do vital daily tasks like heating and cooking, with methods and devices intended for visually unaffected persons, which does not consider the requirements of people with blind and intellectual impairment. Innovative technology needs the proper techniques for perceiving fires as rapidly as possible to avert damages. Initial fire recognition and notification models deliver fire inhibition and protection information to visually challenged individuals in an emergency if a fire happens indoors. Using an early fire recognition and warning model for blind individuals can decrease the number of victims, the number of losses, and, most essentially, early deaths. Recently, the growth of the fire recognition approach using artificial intelligence (AI) has advanced in helping blind people. This manuscript presents a Smart Fire Detection System for Assisting the Blind Using Attention Mechanism-Driven Recurrent Neural Network and Seahorse Optimizer Algorithm (SFDAB-ARNNSHO). The main intention of the SFDAB-ARNNSHO method is to detect and classify fire for blind people. To achieve this, the proposed SFDAB-ARNNSHO model performs image pre-processing by utilizing the sobel filtering (SF) model to remove noise in input data. Furthermore, the fusion of feature extraction comprises three methods, EfficientNetB7, CapsNet, and ShuffleNetV2. Furthermore, the SFDAB-ARNNSHO model performs fire detection and classification using stacked two-layer bidirectional long short-term memory with attention mechanism (SBiLSTM-AM) technique. Finally, the parameter tuning of the SBiLSTM-AM method is accomplished by implementing the seahorse optimizer (SHO) technique. The simulation validation of the SFDAB-ARNNSHO methodology is examined under the fire detection dataset, and the outcomes are measured using various measures. The performance validation of the SFDAB-ARNNSHO methodology portrayed a superior accuracy value of 99.30% over existing models under diverse measures.

Identification of key nodes and vulnerability analysis in airport networks with attention mechanism

Scientific Reports Guangjian Ren, Zongqian Zhang, Yanhua Li Jul 01, 2025 DOI: 10.1038/s41598-025-05219-2

Transparency reduces bribery by shaping beliefs in a public goods experiment with corruption opportunities

Scientific Reports Germana Corrado, Luisa Corrado, Francesca Marazzi Jul 01, 2025 DOI: 10.1038/s41598-025-05011-2