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Discover research articles across all indexed journals

Use of a sperm morphology assessment standardisation training tool improves the accuracy of novice sperm morphologists

Scientific Reports Katherine Rose Seymour, Jessica P. Rickard, Kelsey R. Pool et al. Jul 01, 2025 DOI: 10.1038/s41598-025-07515-3

Investigating the impact of situational awareness and resilience on occupational stress: a case study of nurses in medical and educational hospitals in Ahvaz

Scientific Reports Payam Rashnoudi, Edris Soltani, Atefeh Mohammadinejad et al. Jul 01, 2025 DOI: 10.1038/s41598-025-06570-0

Development and validation of a predictive model for postoperative hepatic dysfunction in Stanford type A aortic dissection

Scientific Reports Xiaotian Han, Wei Wang, Tianxiang Gu et al. Jul 01, 2025 DOI: 10.1038/s41598-025-06024-7

Biogeographic patterns of modern benthic shallow-water molluscs and the roles of temperature and palaeogeographic legacy

Scientific Reports Thomas A. Neubauer, Serge Gofas, Mathias Harzhauser Jul 01, 2025 DOI: 10.1038/s41598-025-06473-0

Abstract Unveiling the processes that lead to biogeographic regionalisation is key to understanding the links between micro- and macroevolution, community processes and macroecology. However, many studies focus on present-day conditions while neglecting geological and palaeontological history. Here, we review the relevance of contemporary climatic conditions and ocean circulation patterns and their geological legacy on the distribution of marine benthic biota, using Mollusca as a model group. Based on global gridded occurrence data, we computed hierarchical cluster analyses and non-metric multidimensional scalings using Simpson’s distance index at three systematic ranks (species, genus, family). Generalised additive models were applied to assess the relationship between taxon distribution and global sea-surface temperature. In addition, we introduce a novel method to quantify the geographic coherence of clusters identified by cluster analysis to ascertain biogeographically meaningful interpretation. We show that contemporary climate and palaeogeographic changes, which have shaped ocean circulation patterns over geological time, have had a significant impact on the global distribution of benthic shallow-water marine molluscs. Our results indicate a high level of provincialism for species, slightly less so for genera, and a polar vs. circum-temperate–tropical structure for families. The biogeographic units defined by our cluster analyses match existing ocean currents for species, while the poorer regionalisation for genus- and family-level data is the result of geologically young seaways or land bridges. Our findings evidence the importance of considering historical processes for the biogeography of modern faunas.

Transformer model with external token memories and attention for PersonaChat

Scientific Reports Taize Sun, Katsuhide Fujita Jul 01, 2025 DOI: 10.1038/s41598-025-98850-y

Biocompatible porous PAM/CNT nanocomposite hydrogel films for sustained drug delivery and cancer therapy

Scientific Reports Alireza Yaghoubi, Ali Ramazani, Mika Sillanpää et al. Jul 01, 2025 DOI: 10.1038/s41598-025-05473-4

BET bromodomain inhibitors attenuate transcription of a subset of IL-1-induced NF-κB targets that promote inflammation in β-cells

Journal of Biological Chemistry Joshua A. Nord, Savannah J. Makowski, Paul F.W. Sidlowski et al. Jul 01, 2025 DOI: 10.1016/j.jbc.2025.110358

Next-Generation Sequencing (NGS) in non-small cell lung carcinoma: A real-world experience in the public health system of Galicia (Northwest Spain)

PLoS ONE Ihab Abdulkader-Nallib, José Manuel Cameselle-Teijeiro, Iván Lesende-Rodríguez et al. Jul 01, 2025 DOI: 10.1371/journal.pone.0326336

The validation of several predictive biomarkers has improved the clinical outcomes of non-small cell lung carcinoma (NSCLC) patients. Single tests do not cover the mutational co-occurrences, so they do not detect other alterations, which in many cases are responsible for disease progression. We describe the development and implementation of a customized next generation sequencing (NGS) panel. We analyzed 236 formalin-fixed paraffin-embedded (FFPE) NSCLC samples from the Clinical University Hospital of Santiago de Compostela (Galicia, Northwest Spain) in 2020. Detection of EGFR, KRAS, NRAS, BRAF mutations and ALK, ROS1 rearrangements were determined by real-time polymerase chain reaction (RT-PCR), immunohistochemistry (IHC) and fluorescence in situ hybridization (FISH). These results were compared with those obtained by the NGS panel to evaluate the performance of the NGS method and to identify potential novel mutations. Ten discrepancies between NGS and the orthogonal methods were found: 2 cases in the EGFR gene, 1 in the KRAS gene, 5 in the BRAF gene and 2 in the ALK gene. The most prevalent pathogenic alterations detected by NGS were: TP53 (48.7%), KRAS (23.7%), STK11 (9.7%), EGFR (8.5%), PIK3CA (5.5%), CDKN2A (4.7%), BRAF (3.4%) and MET exon skipping 14 (3%); rearrangements were found in ALK and RET (3.5% and 1.7%, respectively). 41.5% of NSCLC patients are harbored co-occurring mutations. Our findings confirmed the robustness, sensitivity and specificity of NGS compared to conventional approaches. NGS has a role not only in the detection of actionable alterations (including concurrent mutations), but also in stratifying patients for therapy.

Eco conscious synthesis of poly(tetramethylene itaconate) emphasizing inhibitor free and solvent free sustainability

Scientific Reports Magdalena Miętus, Maria Marecka, Tomasz Gołofit et al. Jul 01, 2025 DOI: 10.1038/s41598-025-07356-0

Construction of intelligent gymnastics teaching model based on neural network and artificial intelligence

Scientific Reports Guanxi Fan, Yu Wang, Tongling Wang et al. Jul 01, 2025 DOI: 10.1038/s41598-025-06839-4

Experimental study on rheological properties of serrate discontinuity under stepwise loading

Scientific Reports Guang-hui Tian, Bao-qing Mei, Qing-zhao Zhang et al. Jul 01, 2025 DOI: 10.1038/s41598-025-04492-5

Abstract Serrate discontinuity creep and stress relaxation tests are conducted to analyze the differences and relationships between creep, relaxation, and long-term strength using the same normal stress and shear stress levels. Both the creep and relaxation curves may be classified into two different phases: decelerating and steady. However, the trend of the creep curve is opposite to that of the stress relaxation curve. Additionally, we observed that the maximum creep displacement and maximum relaxation stress increase as the slope angle increases. The energy changing properties of rocks during creep and relaxation processes are unequal, as indicated by experiment results, indicating that creep and relaxation are not equal. An empirical model has been developed for the maximal relaxation stress and the shear stress level, which provides a better fit to the experimental data. Based on the same mechanism, the long-term strength determined by the creep test and the relaxation test shows little difference and is both close to the yield strength of the stress-displacement curves during the creep and relaxation processes, respectively. This study can provide a deeper understanding of the time-dependent characteristics of discontinuities by integrating creep, relaxation, and long-term strength.

A multicenter cross-sectional study on quality of life and influencing factors in patients with 10 kinds of chronic diseases

Scientific Reports Chenyao Li, Ying Chen, Wu Li et al. Jul 01, 2025 DOI: 10.1038/s41598-025-05353-x

Channa argus optimizer for solving numerical optimization and engineering problems

Scientific Reports Da Fang, Jun Yan, Quan Zhou Jul 01, 2025 DOI: 10.1038/s41598-025-08517-x

The effects of voltage dependence and ion-binding reaction rates on a thermodynamically constrained mathematical model of the Na/Ca exchanger

Scientific Reports Shaocong Ou, Zhongyang Xiao, Keika Oyama et al. Jul 01, 2025 DOI: 10.1038/s41598-025-07881-y

Comparative analysis of clinical characteristics of odontogenic maxillary sinus diseases associated with or without dental implants

Scientific Reports Tae-Gyun Kim, Chang-Ho WhangBo, Mi-Kyung Ye et al. Jul 01, 2025 DOI: 10.1038/s41598-025-07832-7

An optimized demand response framework for enhancing power system reliability under wind power and EV-induced uncertainty

Scientific Reports Hadi Pakbin, Amin Karimi, Mohammad Naseh Hassanzadeh Jul 01, 2025 DOI: 10.1038/s41598-025-05482-3

Towards a universal snake antivenom

Nature Reviews Drug Discovery Sarah Crunkhorn Jul 01, 2025 DOI: 10.1038/d41573-025-00092-0

Targeted removal of the 16S rRNA anti-Shine–Dalgarno sequence by a Mycobacterium tuberculosis MazF toxin

Journal of Biological Chemistry Timothy W. Sherrier, Valdir C. Barth, Jason M. Schifano et al. Jul 01, 2025 DOI: 10.1016/j.jbc.2025.110323

Novel extensions of k-harmonically convex functions and their applications in information science

PLoS ONE Asfand Fahad, Shigeru Furuichi, Zammad Ali et al. Jul 01, 2025 DOI: 10.1371/journal.pone.0320192

Convex analysis theory has found extensive applications in optimization, information science, and economics, leading to numerous generalizations of convex functions. However, a drawback in the vast literature on convex functions is that only a limited number of these notions significantly impact practical applications. With this context, we explore a novel convexity notion known as k-harmonically convex function (k-HCF) using two approaches and present applications in information science. First, we propose an r-parameterized extension of k-HCF, broadening its applicability. Secondly, we extend this concept to interval-valued functions (IVFs), based on a complete order relation on closed bounded intervals. We then investigate properties and inequalities for both extensions to derive lower bounds for information-theoretic measures such as Tsallis entropy, Shannon entropy, and Tsallis relative entropy, using the new parametric extensions of these functions. Additionally, we prove inequalities of the Jensen, Mercer, and Hermite-Hadamard types for the Cr-order-based extension of k-HCFs. Our findings reproduce known results while introducing significant new insights into the field, showing the broader usefulness of k-HCFs in information science.

Physical exercise moderates the mediating effect of depressive symptoms between sleep quality and suicidal ideation among college students

Scientific Reports Yanying Liu, Yao Tong, Guihua Huang et al. Jul 01, 2025 DOI: 10.1038/s41598-025-07767-z