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Prediction of ADMET profile and anti-inflammatory potential of chamuangone

Scientific Reports Sompot Jantarawong, Puripat Wathanaphanit, Pharkphoom Panichayupakaranant et al. Jan 23, 2025 DOI: 10.1038/s41598-025-86809-y

Genetic analysis and heterosis breeding of seed yield and yieldattributing traits in Indian mustard (Brassica juncea (L.) Czern & Coss.)

Scientific Reports Sanghamitra Rout, Suvendu Kumar Roy, Rupsanatan Mandal et al. Jan 23, 2025 DOI: 10.1038/s41598-025-86621-8

Compact inverse designed vertical coupler with bottom reflector for sub-decibel fiber-to-chip coupling on silicon on insulator platform

Scientific Reports Shiang-Yu Huang, Stefanie Barz Jan 23, 2025 DOI: 10.1038/s41598-025-86161-1

Abstract Inverse design via topology optimization has led to innovations in integrated photonics and offers a promising way for designing high-efficiency on-chip couplers with a minimal footprint. In this work, we exploit topology optimization to design a compact vertical coupler incorporating a bottom reflector, which achieves sub-decibel coupling efficiency on the 220-nm silicon-on-insulator platform. The final design of the vertical coupler yields a predicted coupling efficiency of −0.35 dB at the wavelength of 1550 nm with a footprint of 14 µm $$\times$$ × 14 µm, which is considerably smaller than conventional grating couplers. Its topology-optimized geometry can be realized by applying one full-etch and one 70-nm shallow-etch process and the fabricability is also guaranteed by a minimum feature size around 150 nm. Analysis of the potential fabrication imperfections indicates that the topology-optimized coupler is more resilient to in-plane variations, as the deviation of approximately ±100 nm in the misalignment of the topology-optimized features, ±20 nm in the size of the topology-optimized features, and ±10 nm in shallow etch depth yields an additional 1-dB loss as a penalty at the wavelength of 1550 nm. The proposed vertical coupler can further miniaturize photonic integrated circuits and enable highly-efficient networks between optical fibers and other photonic devices.

The application of mind mapping in the standardized education of inpatient physicians in nephrology

Scientific Reports Yao Hu, Yuanbin Xiang, Min Lei et al. Jan 23, 2025 DOI: 10.1038/s41598-025-87692-3

A thin film optoelectronic photodetector of spherical and linear resonators via one-pot synthesis of Bi(III) oxide/polypyrrole nanocomposite

Scientific Reports Fatemah H. Alkallas, Mohamed Rabia, Fedor V. Kusmartsev et al. Jan 23, 2025 DOI: 10.1038/s41598-025-86092-x

The global air pollution and undernutrition among children under five

Scientific Reports Rozhan Khezri, Sepideh Jahanian, Mitra Gholami et al. Jan 23, 2025 DOI: 10.1038/s41598-025-87217-y

Simultaneous multimodal measures for aesthetic evaluation of furniture color and form

Scientific Reports Yaohui Ji, Yao Sun, Song Qiu et al. Jan 23, 2025 DOI: 10.1038/s41598-025-87086-5

Calcium hydroxide nanoparticles induce cell death, genomic instability, oxidative stress and apoptotic gene dysregulation on human HepG2 cells

Scientific Reports Hanan R. H. Mohamed, Esraa H. Ibrahim, Shahd E. E. Shaheen et al. Jan 23, 2025 DOI: 10.1038/s41598-025-86401-4

Abstract Calcium hydroxide nanoparticles (Ca(OH)2NPs) possess potent antimicrobial activities and unique physical and chemical properties, making them valuable across various fields. However, limited information exists regarding their effects on genomic DNA integrity and their potential to induce apoptosis in normal and cancerous human cell lines. This study thus aimed to evaluate the impact of Ca(OH)2NPs on cell viability, genomic DNA integrity, and oxidative stress induction in human normal skin fibroblasts (HSF) and cancerous hepatic (HepG2) cells. Cell viability and genomic DNA stability were assessed using the Sulforhodamine B (SRB) assay and alkaline comet assay, respectively. Reactive oxygen species (ROS) levels were measured using 2,7-dichlorofluorescein diacetate, while the expression level of apoptosis-related genes (p53, Bax, and Bcl-2) were quantified using real-time PCR (qRT-PCR). The SRB cytotoxicity assay revealed that a 48-hour exposure to Ca(OH)2NPs caused concentration-dependent cell death and proliferation inhibition in both HSF and HepG2 cells, with IC50 values of 271.93 µg/mL for HSF and 291.8 µg/mL for HepG2 cells. Treatment with the IC50 concentration of Ca(OH)2NPs selectively induced significant DNA damage, excessive ROS generation, and marked dysregulation of apoptotic (p53 and Bax) and anti-apoptotic (Bcl-2) gene expression in HepG2 cells, triggering apoptosis. In contrast, exposure of HSF cells to the IC50 concentration of Ca(OH)2NPs caused no significant changes in genomic DNA integrity, ROS generation, or apoptotic gene expression. These findings indicate that Ca(OH)2NPs exhibit concentration-dependent cytotoxicity in both normal HSF and cancerous HepG2 cells. However, exposure to the IC50 concentration was non-genotoxic to normal HSF cells while selectively inducing genotoxicity and apoptosis in HepG2 cancer cells through DNA breaks and ROS-mediated mechanisms. Further studies are required to explore the biological and toxicological properties and therapeutic potential of Ca(OH)2NPs in hepatic cancer treatment.

Assumptions and perceptions of food wasting behavior and intention to reduce food waste in the case of Generation Y and Generation X

Scientific Reports László Mucha, Titanilla Oravecz Jan 23, 2025 DOI: 10.1038/s41598-025-86252-z

Abstract One of the global problems of our time is food waste that is most significant at the household level. There is a lack of research that focus on the food-wasting behavior of the main breadwinner groups in society, generations Y and X. To fill this gap, the purpose of this study is to analyse the factors that influence the food-wasting behavior of these groups. From data of a representative sample of 1,665 respondents by using structural equation modeling it is shown that the intention of reducing food waste is positively influenced by attitudes, health-, price and environmental consciousness, planning routines and ecological motives. The results show that influences from the immediate environment and the media are not effective, therefore programs dealing with the future of the Earth, children and sustainability, which strengthen environmental and ecological awareness and planning routines in generations X and Y are recommended.

An exploration of RSM, ANN, and ANFIS models for methylene blue dye adsorption using Oryza sativa straw biomass: a comparative approach

Scientific Reports Sheetal Kumari, Smriti Agarwal, Manish Kumar et al. Jan 23, 2025 DOI: 10.1038/s41598-025-87274-3

Author Correction: Predictive model for abdominal liposuction volume in patients with obesity using machine learning in a longitudinal multi-center study in Korea

Scientific Reports Hyunji Sang, Jaeyu Park, Soeun Kim et al. Jan 23, 2025 DOI: 10.1038/s41598-025-87065-w

These are the 20 most-studied bacteria — the majority have been ignored

Nature Ewen Callaway Jan 23, 2025 DOI: 10.1038/d41586-025-00038-x

Constitutive expression of Cas9 and rapamycin-inducible Cre recombinase facilitates conditional genome editing in Plasmodium berghei

Scientific Reports Samhita Das, Tanaya Unhale, Carine Marinach et al. Jan 23, 2025 DOI: 10.1038/s41598-025-87114-4

Abstract Malaria is caused by protozoan parasites of the genus Plasmodium and remains a global health concern. The parasite has a highly adaptable life cycle comprising successive rounds of asexual replication in a vertebrate host and sexual maturation in the mosquito vector Anopheles. Genetic manipulation of the parasite has been instrumental for deciphering the function of Plasmodium genes. Conventional reverse genetic tools cannot be used to study essential genes of the asexual blood stages, thereby necessitating the development of conditional strategies. Among various such strategies, the rapamycin-inducible dimerisable Cre (DiCre) recombinase system emerged as a powerful approach for conditional editing of essential genes in human-infecting P. falciparum and in the rodent malaria model parasite P. berghei. We previously generated a DiCre-expressing P. berghei line and validated it by conditionally deleting several essential asexual stage genes, revealing their important role also in sporozoites. Another potent tool is the CRISPR/Cas9 technology, which has enabled targeted genome editing with higher accuracy and specificity and greatly advanced genome engineering in Plasmodium spp. Here, we developed new P. berghei parasite lines by integrating the DiCre cassette and a fluorescent marker in parasites constitutively expressing Cas9. Owing to the dual integration of CRISPR/Cas9 and DiCre, these new lines allow unparalleled levels of gene modification and conditional regulation simultaneously. To illustrate the versatility of this new tool, we conditionally knocked out the essential gene encoding the claudin-like apicomplexan micronemal protein (CLAMP) in P. berghei and confirmed the role of CLAMP during invasion of erythrocytes.

Earth breaches 1.5 °C climate limit for the first time: what does it mean?

Nature Jeff Tollefson Jan 23, 2025 DOI: 10.1038/d41586-025-00010-9

Ex vivo detection of recreationally consumed nitrous oxide in exhaled breath

Scientific Reports Dinesh Durán Jiménez, Frederick Vinckenbosch, Joris Busink et al. Jan 23, 2025 DOI: 10.1038/s41598-025-86666-9

Voter turnout drives margins of victory ― if elections are fair

Nature Jan 23, 2025 DOI: 10.1038/d41586-025-00023-4

Comparative analysis of biodiversity, physiology, and anatomical adaptations in riparian flora exposed to industrial pollution stress

Scientific Reports Mansour K. Gatasheh, Toqeer Abbas, Shifa Shaffique et al. Jan 23, 2025 DOI: 10.1038/s41598-025-87396-8

Jimmy Carter obituary: former US president who dedicated his life after office to peace, human rights and global health

Nature Julie Jacobson Jan 23, 2025 DOI: 10.1038/d41586-025-00067-6

A multi-spectral and hyperspectral image dataset for evaluating chemical traits and the water status of avocado, olive and grape through leaf dehydration under laboratory conditions

Scientific Reports Juan Sebastian Estrada, Rodrigo Demarco, Ciarán Miceal Johnson et al. Jan 23, 2025 DOI: 10.1038/s41598-025-85714-8

Author Correction: Progressive plasticity during colorectal cancer metastasis

Nature Andrew Moorman, Elizabeth K. Benitez, Francesco Cambuli et al. Jan 23, 2025 DOI: 10.1038/s41586-024-08560-0