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Tumor detection on bronchoscopic images by unsupervised learning

Scientific Reports Qingqing Liu, Haoliang Zheng, Zhiwei Jia et al. Jan 02, 2025 DOI: 10.1038/s41598-024-81786-0

Northern Hemisphere sea ice variability in a transient CGCM simulation of the past 2.6 Ma

Nature Communications Gagan Mandal, Soon-Il An, Jae-Heung Park et al. Jan 02, 2025 DOI: 10.1038/s41467-024-55327-2

Association between psoas muscle mass index and bone mineral density in patients undergoing hemodialysis

Scientific Reports Kiyonori Ito, Susumu Ookawara, Hidenori Sanayama et al. Jan 02, 2025 DOI: 10.1038/s41598-024-84873-4

AbstractPatients undergoing dialysis are at risk of osteoporosis and sarcopenia because of mineral and bone disorders or malnutrition. Additionally, maintaining muscle mass is important to prevent osteoporosis. The psoas muscle mass index (PMI) was recently used to evaluate muscle mass. However, few studies have evaluated the association between the PMI and bone mineral density (BMD); therefore, we examined the association between PMI and BMD in the femoral neck (FN) of 80 patients (45 males, age, 71 (60–76) years; dialysis duration, 74 (36–140) months) undergoing hemodialysis. FN-BMD was measured using dual-energy X-ray absorptiometry, and PMI was evaluated using psoas muscle areas on computed tomography. FN-BMD and PMI were significantly higher in males than in females. In a correlation analysis, sex, BMI, serum creatinine levels, HbA1c levels, and PMI were positively correlated with FN-BMD, whereas age, history of bone fracture, difficulty in walking and bone-specific alkaline phosphatase level were negatively correlated. In the multivariate regression analysis using clinical factors significantly correlated to FN-BMD, including PMI, both sex (standardized coefficient: 0.249, p = 0.028) and PMI (standardized coefficient: 0.249, p = 0.038) were extracted. Multivariable linear regression analysis using PMI and traditional osteoporosis factors revealed that PMI was significantly and independently associated with FN-BMD (standardized coefficient: 0.308, p = 0.010). In conclusion, PMI was positively associated with FN-BMD. Attention should be paid to the possibility of decreased BMD with decreased muscle mass.

Computational and GC-MS screening of bioactive compounds from Thymus Vulgaris targeting mycolactone protein associated with Buruli ulcer

Scientific Reports Muhammad Naveed, Imran Ali, Tariq Aziz et al. Jan 02, 2025 DOI: 10.1038/s41598-024-83908-0

Leveraging haplotype information in heritability estimation and polygenic prediction

Nature Communications Jonas Meisner, Michael Eriksen Benros, Simon Rasmussen Jan 02, 2025 DOI: 10.1038/s41467-024-55477-3

Feeding behavior and prey characteristics of great egrets (Ardea alba) in eco-friendly and conventional rice fields in South Korea

Scientific Reports Green Choi, Min Seock Do, Seok-Jun Son et al. Jan 02, 2025 DOI: 10.1038/s41598-024-83519-9

In-vitro antifungal potential of myco versus bacteria synthesized ZnO NPs against chickpea and apricot pathogen

Scientific Reports Junaid Ahmed, Farhana, Ghulam Ali Manzoor et al. Jan 02, 2025 DOI: 10.1038/s41598-024-84438-5

A tunable human intestinal organoid system achieves controlled balance between self-renewal and differentiation

Nature Communications Li Yang, Xulei Wang, Xingyu Zhou et al. Jan 02, 2025 DOI: 10.1038/s41467-024-55567-2

The relationship between prenatal drought exposure and the diversity and composition of gut microbiome in pregnant women and neonates

Scientific Reports Qingbo Fang, Tianlai Qiu, Fenglan Chen et al. Jan 02, 2025 DOI: 10.1038/s41598-024-82148-6

Investigating the inflammatory effect of microplastics in cigarette butts on peripheral blood mononuclear cells

Scientific Reports Monire Soltani, Abbas Shahsavani, Philip K. Hopke et al. Jan 02, 2025 DOI: 10.1038/s41598-024-84784-4

DSIF factor Spt5 coordinates transcription, maturation and exoribonucleolysis of RNA polymerase II transcripts

Nature Communications Krzysztof Kus, Loïc Carrique, Tea Kecman et al. Jan 02, 2025 DOI: 10.1038/s41467-024-55063-7

AbstractPrecursor messenger RNA (pre-mRNA) is processed into its functional form during RNA polymerase II (Pol II) transcription. Although functional coupling between transcription and pre-mRNA processing is established, the underlying mechanisms are not fully understood. We show that the key transcription termination factor, RNA exonuclease Xrn2 engages with Pol II forming a stable complex. Xrn2 activity is stimulated by Spt5 to ensure efficient degradation of nascent RNA leading to Pol II dislodgement from DNA. Our results support a model where Xrn2 first forms a stable complex with the elongating Pol II to achieve its full activity in degrading nascent RNA revising the current ‘torpedo’ model of termination, which posits that RNA degradation precedes Xrn2 engagement with Pol II. Spt5 is also a key factor that attenuates the expression of non-coding transcripts, coordinates pre-mRNA splicing and 3’-end processing. Our findings indicate that engagement with the transcribing Pol II is an essential regulatory step modulating the activity of RNA enzymes such as Xrn2, thus advancing our understanding of how RNA maturation is controlled during transcription.

Optimism bias, judgment of severity, and behavioral change during two stages of the pandemics in China

Scientific Reports Dannuo Lyu, Fanli Jia, Xiaosong Gai Jan 02, 2025 DOI: 10.1038/s41598-024-84057-0

Elimination of nickel ions in a packed column using clamshell waste as an adsorbent

Scientific Reports S. Baskar, K. R. Aswin Sidhaarth, L. Mangaleshwaran et al. Jan 02, 2025 DOI: 10.1038/s41598-024-82267-0

Meta-EA: a gene-specific combination of available computational tools for predicting missense variant effects

Nature Communications Panagiotis Katsonis, Olivier Lichtarge Jan 02, 2025 DOI: 10.1038/s41467-024-55066-4

Geriatric nutritional risk index and newly developed scoring system as prognosis prediction for unresectable hepatocellular carcinoma patients treated with lenvatinib

Scientific Reports Hideko Ohama, Atsushi Hiraoka, Toshifumi Tada et al. Jan 02, 2025 DOI: 10.1038/s41598-024-78539-4

Nucleotide metabolism-associated drug resistance gene NDUFA4L2 promotes colon cancer progression and 5-FU resistance

Scientific Reports Hongxin HE, Shiyao ZHENG, Shangkun JIN et al. Jan 02, 2025 DOI: 10.1038/s41598-024-84353-9

Living plastics from plasticizer-assisted thermal molding of silk protein

Nature Communications Yushu Wang, Junqi Wu, Emily J. Hartzell et al. Jan 02, 2025 DOI: 10.1038/s41467-024-55097-x

Subtilisin-like protease 4 regulates cold tolerance through cell wall modification in rice

Scientific Reports Jingyan Liu, Fei He, Zhicai Chen et al. Jan 02, 2025 DOI: 10.1038/s41598-024-84491-0

A genome-wide association study of high-sensitivity C-reactive protein in a large Korean population highlights its genetic relationship with cholesterol metabolism

Scientific Reports Kwangyeon Oh, Minju Yuk, Soyoun Yang et al. Jan 02, 2025 DOI: 10.1038/s41598-024-84466-1

Multiphase superconductivity in PdBi2

Nature Communications Lewis Powell, Wenjun Kuang, Gabriel Hawkins-Pottier et al. Jan 02, 2025 DOI: 10.1038/s41467-024-54867-x

AbstractUnconventional superconductivity, where electron pairing does not involve electron-phonon interactions, is often attributed to magnetic correlations in a material. Well known examples include high-Tc cuprates and uranium-based heavy fermion superconductors. Less explored are unconventional superconductors with strong spin-orbit coupling, where interactions between spin-polarised electrons and external magnetic field can result in multiple superconducting phases and field-induced transitions between them, a rare phenomenon in the superconducting state. Here we report a magnetic-field driven phase transition in β-PdBi2, a layered non-magnetic superconductor. Our tunnelling spectroscopy on thin PdBi2 monocrystals incorporated in planar superconductor-insulator-normal metal junctions reveals a marked discontinuity in the superconducting properties with increasing in-plane field, which is consistent with a transition from conventional (s-wave) to nodal pairing. Our theoretical analysis suggests that this phase transition may arise from spin polarisation and spin-momentum locking caused by locally broken inversion symmetry, with p-wave pairing becoming energetically favourable in high fields. Our findings also reconcile earlier predictions of unconventional multigap superconductivity in β-PdBi2 with previous experiments where only a single s-wave gap could be detected.