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Annual migrations, vertical habitat use and fidelity of Atlantic bluefin tuna tracked from waters off the United Kingdom

Scientific Reports Thomas W. Horton, Francis C. T. Binney, Samantha Birch et al. Jan 02, 2025 DOI: 10.1038/s41598-024-80861-w

Abstract Understanding the spatial ecology of commercially exploited species is vital for their conservation. Atlantic bluefin tuna (Thunnus thynnus, ABT) are increasingly observed in northeast Atlantic waters, yet knowledge of these individuals’ spatial ecology remains limited. We investigate the horizontal and vertical habitat use of ABT (158 to 241 cm curved fork length; CFL) tracked from waters off the United Kingdom (UK) using pop-up satellite archival tags (n = 63). Analyses reveal distinctive movements from the UK to the Bay of Biscay (BoB) and Central North Atlantic between September and December, and size-specific habitat preferences in May and July—all ABT < 175 cm CFL inhabiting the BoB and 73% of ABT ≥ 175 the Mediterranean Sea. All ABT tracked for more than 300 days (n = 25) returned to waters off the UK the following year, where most stayed (n = 22; 88%) and three continuing north with deployments ending off northwest Ireland. ABT mostly occupied waters between 0 and 20 m (daytime 49 ± 6% of time; nighttime 71 ± 6%). Vertical habitat use was coupled with illumination, mean depth occupied, maximum depth reached, and vertical movement rate increased during the daytime and when moons were brightest. These data provide valuable insights into the spatial ecology of ABT reoccupying northerly foraging areas following decades of absence.

Modulating synaptic plasticity with metal−organic framework for information-filterable artificial retina

Nature Communications Seongchan Kim, Ohchan Kwon, Seonkwon Kim et al. Jan 02, 2025 DOI: 10.1038/s41467-024-55173-2

Effect of partial and total replacement of fishmeal by soybean meal in feed on growth and gut performance of Penaeus vannamei

Scientific Reports Chanadda Kasamechotchung, Natthinee Munkongwongsiri, Pichet Plaipetch et al. Jan 02, 2025 DOI: 10.1038/s41598-024-83494-1

lncRNA CHAF1B-2 contributes to the tumorigenesis of gastric cancer by activating the Wnt/β-catenin pathway

Scientific Reports Shao-Qi Tian, Jun-Jie Shen, Dao-Ping Sun et al. Jan 02, 2025 DOI: 10.1038/s41598-024-84344-w

Abstract Lnc-CHAF1B-2, a newly discovered long noncoding RNA (lncRNA), plays a significant role in the evolution and prognosis of diverse neoplasms. However, its role in the development of gastric cancer is not yet fully understood. Using bioinformatics analysis of gastric cancer RNA-seq data from The Cancer Genome Atlas (TCGA) database, we investigated the expression of lnc-CHAF1B-2 in gastric carcinoma and its associated molecular signalling pathways. Verification through an array of in vivo and in vitro experiments—namely, EdU incorporation, flow cytometry, trans-well migration and invasion assays, subcutaneous tumour formation in nude mice, and western blot analysis—was conducted. We revealed notable upregulation of lnc-CHAF1B-2 in gastric cancer tissues. Furthermore, a positive correlation was detected between lnc-CHAF1B-2 levels and the occurrence of distant metastases in patients, which was inversely related to their prognostic outlook and survival rates. Moreover, our findings confirmed that lnc-CHAF1B-2 enhanced the proliferation, invasion, and migration of gastric cancer cells while inhibiting apoptosis both in vitro and in vivo. Mechanistically, lnc-CHAF1B-2 promoted the progression of gastric cancer through activating the Wnt/β-catenin signalling pathway. Thus, lnc-CHAF1B-2 and its regulation of the Wnt/β-catenin signalling pathway have emerged as prospective therapeutic targets in gastric cancer management.

Development and validation of a real-time prediction model for acute kidney injury in hospitalized patients

Nature Communications Yuhui Zhang, Damin Xu, Jianwei Gao et al. Jan 02, 2025 DOI: 10.1038/s41467-024-55629-5

Exploring the catalytic hydrothermal liquefaction of Namibian encroacher bush

Scientific Reports Luis Cutz, Nikos Bias, Majd Al-Naji et al. Jan 02, 2025 DOI: 10.1038/s41598-024-83881-8

AbstractAn urgent ecological issue is the threat posed by invasive species, which are becoming more widespread especially in Africa. These encroachments damage ecosystems, pose a threat to biodiversity, and outcompete local plants and animals. This article focuses on converting Acacia Mellifera from Namibia, commonly known as encroacher bush (EB) into high-quality drop-in intermediates for the chemical and transport industry via hydrothermal liquefaction (HTL). HTL tackles the growing need for sustainable energy carriers while simultaneously halting the spread of the invasive species. A surface response methodology was used to optimize the HTL process for the following operational conditions: temperature (250–340 °C), residence time (5–60 min) and catalyst loading (0–10 wt%). The catalyst of choice was determined after evaluating the energy recovery (ER) of four different catalysts (Zeolite, La2O3, Hydrotalcite, Ni/SiO2–Al2O3) under the same HTL operational conditions. The results indicate that the addition of hydrotalcite results in high yields of bio-crude oil (13–28 wt%), without compromising the high heating value (HHV, 26–31 MJ/kg), water content (0.47 wt%) or increasing the content of oxygenated compounds compared to the non-catalytic experiment. For the experimental conditions tested, we observed a global maximum in conversion in the 330 °C and 30 min range. Our findings indicate that the most significant factor on the conversion of EB into bio-crude oil was temperature, followed by the catalyst loading. Furthermore, biochars produced at 330 °C and 30 min show potential as solid biofuels with HHVs up to 28.30 MJ/kg.

Acute mesenteric ischaemia in the elderly - results of combined endovascular and surgical treatment. Primary study

Scientific Reports R. Vrba, T. Řezáč, P. Špička et al. Jan 02, 2025 DOI: 10.1038/s41598-024-84026-7

Incidental iron oxide nanoclusters drive confined Fenton-like detoxification of solid wastes towards sustainable resource recovery

Nature Communications Zhichao Yang, Yuyang Yin, Mengyuan Liang et al. Jan 02, 2025 DOI: 10.1038/s41467-024-55625-9

Incremental shuttle walking test for calf muscle oxygenation assessment in peripheral arterial disease: a cross-sectional study

Scientific Reports Patrícia Paulino Geisel, Isabella de Oliveira Nascimento, Marina Mendonça Gonçalves Machado et al. Jan 02, 2025 DOI: 10.1038/s41598-024-84662-z

Genome sequencing reveals novel variants in a diverse population with congenital anterior segment anomalies

Scientific Reports Ashraf Hussain, Maria Fernanda Villalba, Dayna Morel Swols et al. Jan 02, 2025 DOI: 10.1038/s41598-024-84205-6

Reduced adult stem cell fate specification led to eye reduction in cave planarians

Nature Communications Luiza O. Saad, Thomas F. Cooke, Kutay D. Atabay et al. Jan 02, 2025 DOI: 10.1038/s41467-024-54478-6

Abstract Eye loss occurs convergently in numerous animal phyla as an adaptation to dark environments. We investigate the cave planarian Girardia multidiverticulata (Gm), a representative species of the Spiralian clade, to study mechanisms of eye loss. We found that Gm, which was previously described as an eyeless species, retains rudimentary and functional eyes. Eyes are maintained in homeostasis and regenerated in adult planarians by stem cells, called neoblasts, through their fate specification to eye progenitors. The reduced number of eye cells in cave planarians is associated with a decreased rate of stem cell fate specification to eye progenitors during homeostasis and regeneration. Conversely, the homeostatic formation of new cells from stem cell-derived progenitors for other tissues, including for neurons, pharynx, and epidermis, is comparable between cave and surface species. These findings reveal a mode of evolutionary trait loss, with change in rate of fate specification in adult stem cells leading to tissue size reduction.

Salient object detection with non-local feature enhancement and edge reconstruction

Scientific Reports Tao Xu, Jingyao Jiang, Lei Cai et al. Jan 02, 2025 DOI: 10.1038/s41598-024-84680-x

Failure risk study of anchor bolts durability for loess slope under long-term hydro-thermal effect

Scientific Reports Zhou Chang, Weifeng Sun, Changgen Yan et al. Jan 02, 2025 DOI: 10.1038/s41598-024-84106-8

On the longevity and inherent hermeticity of silicon-ICs: evaluation of bare-die and PDMS-coated ICs after accelerated aging and implantation studies

Nature Communications Kambiz Nanbakhsh, Ahmad Shah Idil, Callum Lamont et al. Jan 02, 2025 DOI: 10.1038/s41467-024-55298-4

Abstract Silicon integrated circuits (ICs) are central to the next-generation miniature active neural implants, whether packaged in soft polymers for flexible bioelectronics or implanted as bare die for neural probes. These emerging applications bring the IC closer to the corrosive body environment, raising reliability concerns, particularly for chronic use. Here, we evaluate the inherent hermeticity of bare die ICs, and examine the potential of polydimethylsiloxane (PDMS), a moisture-permeable elastomer, as a standalone encapsulation material. For this aim, the electrical and material performance of ICs sourced from two foundries was evaluated through one-year accelerated in vitro and in vivo studies. ICs featured custom-designed test structures and were partially PDMS coated, creating two regions on each chip, uncoated “bare die” and “PDMS-coated”. During the accelerated in vitro study, ICs were electrically biased and periodically monitored. Results revealed stable electrical performance, indicating the unaffected operation of ICs even when directly exposed to physiological fluids. Despite this, material analysis revealed IC degradation in the bare regions. PDMS-coated regions, however, revealed limited degradation, making PDMS a suitable IC encapsulant for years-long implantation. Based on the new insights, guidelines are proposed that may enhance the longevity of implantable ICs, broadening their applications in the biomedical field.

Influence of indole acetic acid, arginine and mango fruit waste biochar on nutrients, chlorophyll contents and antioxidants of Fenugreek in salt affected soil

Scientific Reports Misbah Hareem, Sammina Mahmood, Subhan Danish et al. Jan 02, 2025 DOI: 10.1038/s41598-024-84048-1

Cluster analysis of symptoms and assessment of caregiver reports in pediatric foreign bodies

Scientific Reports Sergio Alzate-Ricaurte, Edgar Dario Alzate Gallego, Santiago Correa Salazar et al. Jan 02, 2025 DOI: 10.1038/s41598-024-84042-7

Adjusting Hirshfeld charge of TEMPO catholytes for stable all-organic aqueous redox flow batteries

Nature Communications Gonggen Tang, Wenyi Wu, Yahua Liu et al. Jan 02, 2025 DOI: 10.1038/s41467-024-55244-4

Myocardial mechanical changes before and after bariatric surgery in individuals with obesity and diabetes: a 1-year follow-up study

Scientific Reports Xiaoyan Kang, Linyan Zhou, Yanxia Zhang et al. Jan 02, 2025 DOI: 10.1038/s41598-024-84282-7

Nanostructural and nanomechanical alterations of photosensitized lipid membranes due to light induced formation of reactive oxygen species

Scientific Reports Ádám Zolcsák, Bálint Kiss, Tamás Bozó et al. Jan 02, 2025 DOI: 10.1038/s41598-024-83758-w

Integrated multiomics signatures to optimize the accurate diagnosis of lung cancer

Nature Communications Mengmeng Zhao, Gang Xue, Bingxi He et al. Jan 02, 2025 DOI: 10.1038/s41467-024-55594-z