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Structural, electronic, and optical properties of (2D)MXenes Zr₂CT₂(T = O and F) studied using the (DFT + U) method

Scientific Reports Shahab Rahimi, Ebrahim Heidari Semiromi, Alireza Mostafaei Jul 01, 2025 DOI: 10.1038/s41598-025-04556-6

Improving food packaging safety through cold plasma-treated edible films with Carum copticum extracts

Scientific Reports Fatemeh Ghadiminejad, Akbar Esmaeili, Manzarbanou Asnaashariisfahani Jul 01, 2025 DOI: 10.1038/s41598-025-08161-5

Whole-body inhalation study of nanoparticle-enhanced vegetable oil metalworking fluids in mice for assessing occupational health risks

Scientific Reports Muralidhar Vardhanapu, Phaneendra Kiran Chaganti, Aparajita Ghosh et al. Jul 01, 2025 DOI: 10.1038/s41598-025-06266-5

Abstract The increasing demand for sustainable machining necessitates the development and toxicological evaluation of environmentally friendly alternatives to conventional metalworking fluids (MWFs). This study investigated the respiratory and systemic effects of a nanoparticle-enhanced vegetable oil-based MWF (NPVO-MWF) using a whole-body inhalation exposure model in male C57BL/6 mice. Both sub-acute (4-week) and sub-chronic (13-week) exposures were performed, followed by detailed bioanalytical and histopathological assessments. Cytokine analyses (IL-1β, TNF-α, IL-6) via ELISA and RT-PCR revealed no significant pro-inflammatory responses. Reactive oxygen species (ROS) levels in blood, bronchoalveolar lavage fluid, and lung homogenates remained unchanged, indicating an absence of oxidative stress. Histopathological analysis using hematoxylin and eosin staining showed mild epithelial hyperplasia in sub-chronic exposures. Sirius Red staining revealed minimal collagen deposition and slight reductions in pulmonary airspace. No substantial evidence of lung injury, pulmonary toxicity, or carcinogenicity was observed. This study represents one of the first applications of a whole-body inhalation model for evaluating NPVO-MWFs, addressing a critical gap in occupational health risk assessment. The findings indicate that NPVO-MWFs present low toxicological risk under the tested conditions and offer a viable, sustainable alternative to conventional MWFs. Additional chronic exposure studies are recommended to further establish their occupational safety.

Flexible perovskite/silicon monolithic tandem solar cells approaching 30% efficiency

Nature Communications Yinqing Sun, Faming Li, Hao Zhang et al. Jul 01, 2025 DOI: 10.1038/s41467-025-61081-w

Model-free photon analysis of diffusion-based single-molecule FRET experiments

Nature Communications Ivan Terterov, Daniel Nettels, Tanya Lastiza-Male et al. Jul 01, 2025 DOI: 10.1038/s41467-025-60764-8

Abstract Photon-by-photon analysis tools for diffusion-based single-molecule Förster resonance energy transfer (smFRET) experiments often describe protein dynamics with Markov models. However, FRET efficiencies are only projections of the conformational space such that the measured dynamics can appear non-Markovian. Model-free methods to quantify FRET efficiency fluctuations would be desirable in this case. Here, we present such an approach. We determine FRET efficiency correlation functions free of artifacts from the finite length of photon trajectories or the diffusion of molecules through the confocal volume. We show that these functions capture the dynamics of proteins from nano- to milliseconds both in simulation and experiment, which provides a rigorous validation of current model-based analysis approaches.

Restoring Cell–Cell Communication to Elicit Bystander Effect Using a DNA‐Based Nanocomplex for Robust Immunotherapy

Angewandte Chemie International Edition Yinuo Shu, Guoshi Xu, Minhao Jiang et al. Jul 01, 2025 DOI: 10.1002/anie.202506079

Abstract The activation of the cyclic GMP‐AMP synthase‐stimulator of interferon genes (cGAS‐STING) pathway has shown promise in enhancing antitumor immunity. However, the pathway involved de novo transcription and translation processes, which delays immune responses. Besides, the rapid clearance of the secondary messenger cyclic GMP‐AMP (cGAMP) by extracellular hydrolase limits its availability, attenuating STING signaling and resulting in insufficient therapeutic efficacy. Herein, we constructed a DNA‐based nanocomplex, which could restore cell‐cell communication to elicit bystander effect for enhancing cGAS‐STING responses. By virtue of its capabilities to promote gap junctional intercellular communication for cGAMP transfer and to trigger immunogenic cell death (ICD) of tumor cells through bioorthogonal reaction‐catalyzed drug synthesis, the cGAS‐STING pathway in tumor cells was activated and amplified in a transcription‐independent, horizontal manner. The nanocomplex presented safe and robust antitumor effects against not only primary tumors but also distant and metastatic tumors via abscopal effects. The work highlighted the effects of restoring cell–cell communication on cGAS‐STING activation and provided a new perspective for antitumor immunotherapy.

Development SPE-LC-MS/MS method for determination of WHO AWaRe Reserve antibiotics in hospital wastewater

Scientific Reports Joanna Wilk, Paulina Sowik, Ewa Felis et al. Jul 01, 2025 DOI: 10.1038/s41598-025-04951-z

Abstract Overuse and inadequate legal regulation of the use of antibiotics have led to antimicrobial resistance, which threatens healthcare by reducing the effectiveness of treatments and promoting multidrug-resistant “superbugs”. The World Health Organization created the AWaRe (Access, Watch, Reserve) classification to categorize antimicrobials according to their therapeutic value, emphasizing prudent use. The most important group in terms of protecting effectiveness is the Reserve group. The aim of the study was to develop a method for the determination of the following Reserve antibiotics in hospital wastewater: aztreonam, linezolid, meropenem, tigecycline, vaborbactam, cilastatin, fosfomycin, and ceftazidime. Twenty-six extraction procedures were tested and the one with the best recoveries for all antimicrobials (31.5–103.7%) was selected. The extracts were analyzed by liquid chromatography-tandem mass spectrometry. The method was validated and applied to the determination of the selected pharmaceuticals in effluents from 16 hospitals in Poland, with Reserve antibiotics detected in each sample at concentrations ranging from 1.89 ng L− 1 to 22.49 µg L− 1. This is the first country-scale methodological study on Reserve antibiotics in hospital wastewater, emphasizing the need for early environmental monitoring and the potential integration of such strategies into healthcare systems to mitigate the global antimicrobial resistance crisis.

Analysis of Z-Score and total score of athleticism on drafted and undrafted players from the NFL scouting combine

Scientific Reports Yifan Zhao, Xiaobin Wei, Kewei Zhao Jul 01, 2025 DOI: 10.1038/s41598-025-07383-x

Forest land cover optimization for water management in the Ichawaynochaway creek basin

Scientific Reports Chambers J. English, Seth E. Younger, Steven T. Brantley et al. Jul 01, 2025 DOI: 10.1038/s41598-025-05677-8

Survey and diversity assessment of key insect communities in different grassland types in Inner Mongolia

Scientific Reports Yanrui Li, Liangpeng Ji, Xiaoshuan Bai Jul 01, 2025 DOI: 10.1038/s41598-025-07830-9

The chain mediation effect of rumination and worry between the intentionality and content dimensions of mind wandering and internalizing symptoms of depression and anxiety

Scientific Reports Siqing Guan, Toru Takahashi, Nozomi Tomita et al. Jul 01, 2025 DOI: 10.1038/s41598-025-99249-5

Abstract Rumination and worry, as maladaptive emotion regulation strategies, perpetuate internalizing symptoms of depression and anxiety. However, examinations of dysfunctional mind wandering (MW)—internally oriented thoughts that contribute to emotion dysregulation—and its underlying the cognitive mechanisms related to internalizing symptoms remains limited. This study aimed to identify dysfunctional types of MW associated with internalizing symptoms of depression and anxiety by distinguishing between the intentionality and content of MW. The results indicate that trait rumination and worry sequentially mediate the relationship between the frequency of unintentional MW, which encompasses vague, future-oriented, and negative content, and internalizing symptoms. Furthermore, both single and chained mediation effects were identified in the relationship between unintentional negative MW and internalizing symptoms, with worry acting either as a sole mediator or as a subsequent mediator following rumination in a chain mediation pathway. This study offers novel insight into the distinct roles of rumination and worry as maladaptive emotion regulation strategies, particularly regarding dysfunctional MW types and their contributions to internalizing symptoms of depression and anxiety.

Bioinformatics analysis and preliminary validation of autophagy-related genes in asthma disease

Scientific Reports Bo Sun, Huiman Huang, Ran An et al. Jul 01, 2025 DOI: 10.1038/s41598-025-08316-4

Robustness of quantum correlations in photonic systems under non-Markovian dephasing: theoretical analysis in the experimental range

Scientific Reports Kamal Berrada, Smail Bougouffa Jul 01, 2025 DOI: 10.1038/s41598-025-06304-2

Rice QTL hotspots related with seed grain size, shape, weight, and color based on genome wide association study and linkage mapping

Scientific Reports Rizky Dwi Satrio, Miftahul Huda Fendiyanto, Nisa Nurrahmah et al. Jul 01, 2025 DOI: 10.1038/s41598-025-05814-3

Abstract Rice is a staple crop worldwide, with seed traits such as size, shape, weight, and color playing crucial roles in agricultural productivity and consumer preferences. Despite significant progress, the genetic basis underlying the variation in hulled and unhulled seed grain traits remains partially unexplored. This study presents a comprehensive analysis combining GWAS and QTL mapping to dissect the genetic architecture of hulled and unhulled seed characteristics in rice. The aim is to identify quantitative trait loci (QTLs) associated with these traits using an integration of multi-model approach genome-wide association studies (GWAS) and linkage mapping analysis. The study analyzed 244 local rice varieties for GWAS and 90 Recombinant Inbred Lines for linkage mapping analysis. The traits observed included hulled and unhulled seed grain area, perimeter, length, width, length-to-width ratio, circularity, weight, and color (RGB, HSV, Lab, yCbCr). A total of 23 QTL regions were identified, with two major QTL hotspots located on chromosomes 7 and 2. Specifically, QTL hotspots on chromosome 7 were associated with grain size, shape, and weight, while those on chromosome 2 were linked to seed color. A total of 530 SNPs significantly associated with the traits were distributed across 12 rice chromosomes, corroborating the QTL hotspot regions. Six genes on chromosome 7 and seven genes on chromosome 2 were proposed as candidate genes regulating seed grain traits. These findings provide valuable insights into the genetic control of rice seed traits and offer potential targets for breeding programs aimed at improving rice quality and yield.

Dual TIGIT and PD-1 blockade with domvanalimab plus zimberelimab in hepatocellular carcinoma refractory to anti-PD-1 therapies: the phase 2 LIVERTI trial

Nature Communications David Hsiehchen, Radhika Kainthla, Heather Kline et al. Jul 01, 2025 DOI: 10.1038/s41467-025-60757-7

Long-lived zone-boundary magnons in an antiferromagnet

Nature Communications Jeongheon Choe, David Lujan, Gaihua Ye et al. Jul 01, 2025 DOI: 10.1038/s41467-025-60287-2

Rare Earth Single‐Atomic Hybrid Glasses for Near‐Infrared II Optical Waveguides

Angewandte Chemie International Edition Meiqi Dai, Bo Zhou, Dongpeng Yan Jul 01, 2025 DOI: 10.1002/anie.202505322

Abstract The increasing demands for modern information communication and storage necessitate the development of near‐infrared (NIR) active optical waveguides. However, achieving efficient NIR emission with minimal optical loss remains a critical challenge. Herein, we present a new class of rare earth single‐atomic hybrid glasses, synthesized via bottom‐up self‐assembly, as a solution to these limitations. By harnessing the ultralong phosphorescence of Nd 3+ ‐doped complex glasses, these materials achieve NIR‐II emission extending to 1.32 µm with a photoluminescence quantum yield (PLQY) of ∼5.7%, setting a new record among state‐of‐the‐art rare‐earth‐based complexes in the NIR‐II region. This exceptional performance stems from the efficient sensitization of Nd 3+ ions in hybrid glass, with a phosphorescence energy transfer efficiency of 93.55%. Furthermore, these transparent and flexible hybrid glasses trigger optical waveguiding in Eu 3+ ‐ and Nd 3+ ‐doped microstructures, enabling ultralow‐loss coefficients of 0.978 dB mm −1 at 819 nm and 5.1 dB mm −1 at 1048 nm, respectively. Therefore, this work not only demonstrates that metal–organic complex glasses with ultralong phosphorescence can effectively serve as sensitizer matrices for boosting NIR‐II emission, but also supports the fabrication of 1D and 2D glassy microstructures with ultralow‐loss optical waveguiding for advanced NIR‐II photonic applications.

Clinical performance validation of an integrated cartridge based bedside blood gas analyzer system in the acute care setting

Scientific Reports Lixia Yang, Dazhi Chi, Cuixiang Zhen et al. Jul 01, 2025 DOI: 10.1038/s41598-025-06710-6

Abstract This study aims to evaluate the clinical performance of the EG-i30 blood gas analyzer and its test cartridge (EG10+), a maintenance-free electrochemical point-of-care blood gas analyzer system (referred to as EG), in comparison with the established ABL90 FLEX blood gas analyzer system (referred to as ABL) in the acute care setting. A total of 216 clinical residual samples from 94 patients were analyzed using both systems. Key blood gas and electrolyte parameters, including pH, pO2, pCO2, K+, Na+, iCa2+, Cl−, Lac, Glu, and Hct, were measured. Performance was assessed using statistical methods including Bland-Altman plots, Pearson’s correlation, concordance correlation coefficient (CCC), and Passing-Bablok regression. ROC curve analysis evaluated the EG’s diagnostic performance for hyperlactatemia, hypokalemia, and hyperkalemia. The EG demonstrated excellent correlation with the ABL, with r values ranging from 0.969 to 0.992 and CCC values between 0.958 and 0.991 for all parameters. Bias analysis at the medical decision levels showed that all parameters were within the allowable error limits. ROC analysis for Lac and K+ revealed high sensitivity and specificity. The EG provides reliable and accurate blood gas analysis comparable to the ABL, offering a portable, cost-effective solution for rapid diagnostics in emergency and critical care settings.

Evaluation of transduction efficiency in pancreatic beta and alpha cells utilizing various AAV serotypes

Scientific Reports Vishal Ahuja, Sanjeev Jeyabalan, Emmanuel S. Tzanakakis Jul 01, 2025 DOI: 10.1038/s41598-025-05518-8

A predictive model for electrospun based Polyvinyl alcohol (PVA) nanofibers diameter using an artificial neural network

Scientific Reports Kamran-ul-Haq Khan, Imran Ahmad Siddiqui Jul 01, 2025 DOI: 10.1038/s41598-025-92877-x