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Associated factors and clinical outcomes of feeding intolerance in preterm extremely low birthweight infants

Scientific Reports Stav Soffer, Dror Mandel, Jacky Herzlich et al. Aug 01, 2025 DOI: 10.1038/s41598-025-14386-1

Computational screening identifies selective aldose reductase inhibitors with strong efficacy and limited off target interactions

Scientific Reports Jicli Jose Rojas, Roberto Pestana-Nobles, Leonardo C. Pacheco-Londono et al. Aug 01, 2025 DOI: 10.1038/s41598-025-12859-x

Abstract Diabetes mellitus is characterized by persistent hyperglycemia that triggers micro-vascular complications in organs such as the eyes and kidneys; a pivotal enzymatic driver is aldose reductase (AR), which reduces glucose to sorbitol. Because existing AR inhibitors often cause off-target toxicity, we implemented an integrative in-silico workflow to discover selective, safer compounds. A library of 4 975 small molecules was docked against AR and, in parallel, against five clinically relevant antitarget proteins or proteins whose unintended inhibition is associated with adverse pharmacological or toxicological effects (CYP2A6, CYP2C9, CYP3A4, SULT1A3 and the pregnane X receptor), retaining 236 ligands whose binding energies to every antitarget were weaker than those of the reference drug tolrestat. These survivors were redocked to five high-resolution human AR crystal structures, and the ten best-scoring ligands underwent 100 ns molecular-dynamics simulations followed by MM-PBSA free-energy calculations to refine affinity estimates and probe complex stability. Ligand 4934, a benzo[a]anthracene–pyrene polyphenol, displayed the strongest predicted affinity for while showing poor affinity for the antitarget panel, outperforming tolrestat by more than 2 kcal mol⁻¹ and adopting a stable plug-like pose that occludes the catalytic pocket through extensive π–π and hydrophobic contacts with Trp111, Phe123 and Lys22. These findings highlight ligand 4934 as a promising scaffold for selective AR inhibition and demonstrate the effectiveness of the stepwise computational strategy in prioritizing lead compounds with reduced off-target liabilities.

Prediction of coal mine water conduction fracture zone height based on integrated learning model

Scientific Reports Meng Wang, Xufeng Zhang, Xin Li et al. Aug 01, 2025 DOI: 10.1038/s41598-025-13627-7

Abstract To enhance the accuracy of predicting the height of water-conducting fracture zones (WCFZ) in coal mines, this study proposes a novel stacked ensemble learning model. The model integrates XGBoost and Support Vector Regression (SVR) as base learners, with CatBoost serving as the meta-learner, forming a two-layer architecture. Key geological and mining features—such as mining height, burial depth, working face length, and lithologic proportion coefficient—are used as input variables to better capture the complex influencing factors. Validation using data from the No. 3 coal seam of Husheng Coal Mine demonstrates that the proposed model achieves a predicted WCFZ height of 50.79 m, closely aligning with the measured value and outperforming empirical formulas (61.4 m), standalone SVR (58.14 m), XGBoost (56.62 m), and FLAC3D simulation (55 m). The model also achieves an R² of 0.98 and RMSE of 2.08, indicating excellent predictive performance. This research is the first to introduce stacked ensemble learning for WCFZ height prediction, overcoming the limitations of single-model and simulation-based methods. The proposed approach offers a more accurate and intelligent tool for mine water hazard assessment and represents a significant advancement in applying machine learning to underground geological engineering.

Development mechanism and parameter control of jet impingement based on chaotic modulation

Scientific Reports Xinmin Zhang, Xuyang Li, Hua Wang et al. Aug 01, 2025 DOI: 10.1038/s41598-025-12841-7

Harnessing eDNA technology to identify fish diversity and distribution in the Kashi River, a tributary of the Ili River, Xinjiang, China

Scientific Reports Jiangong Niu, Hui Jia, Tao Zhang et al. Aug 01, 2025 DOI: 10.1038/s41598-025-14079-9

Enhancing stability and power quality in electric vehicle charging stations powered by hybrid energy sources through harmonic mitigation and load management

Scientific Reports Sahar M. Abd Elazim, M. H. Elkholy, A. Elgarhy et al. Aug 01, 2025 DOI: 10.1038/s41598-025-14143-4

A self evolving high performance sharded consortium blockchain designed for secure and trusted resource sharing for 6G networks

Scientific Reports Xiaorong Zhu, Zhiwei Yuan, Qinyin Ni Aug 01, 2025 DOI: 10.1038/s41598-025-11705-4

Classification of diaphyseal tumors based on residual medullary cavity length for prosthetic reconstruction

Scientific Reports Leming Mou, Miao Zhang, Hongyu Wang et al. Aug 01, 2025 DOI: 10.1038/s41598-025-12513-6

Determination of physicochemical properties and bioactive compounds of dried apples by FTIR spectroscopy and multispectral imaging

Scientific Reports Cem Baltacıoğlu, Mehmet Yetişen, Hande Baltacıoğlu et al. Aug 01, 2025 DOI: 10.1038/s41598-025-13464-8

An evolving landscape of PRC2–RNA interactions in chromatin regulation

Nature Reviews Molecular Cell Biology Rodrigo Aguilar, Michael Rosenberg, Vered Levy et al. Aug 01, 2025 DOI: 10.1038/s41580-025-00850-3

A bacterial actin with high ATPase activity regulates the polymerization of a partner MreB isoform essential for Spiroplasma swimming motility

Journal of Biological Chemistry Daichi Takahashi, Hana Kiyama, Hideaki T. Matsubayashi et al. Aug 01, 2025 DOI: 10.1016/j.jbc.2025.110462

p53-regulated non-apoptotic cell death pathways and their relevance in cancer and other diseases

Nature Reviews Molecular Cell Biology Yanqing Liu, Brent R. Stockwell, Xuejun Jiang et al. Aug 01, 2025 DOI: 10.1038/s41580-025-00842-3

Myeloid loss of scaffolding protein menin promotes liver fibrosis via H3K36me3 reprogramming

Journal of Biological Chemistry Qing Han, Yujun Chen, Junbo Yuan et al. Aug 01, 2025 DOI: 10.1016/j.jbc.2025.110471

Recommendations for robust and reproducible research on ferroptosis

Nature Reviews Molecular Cell Biology Eikan Mishima, Toshitaka Nakamura, Sebastian Doll et al. Aug 01, 2025 DOI: 10.1038/s41580-025-00843-2

Copper acquisition in Bacillus subtilis involves Cu(II) exchange between YcnI and YcnJ

Journal of Biological Chemistry Yuri Rafael de Oliveira Silva, Grayson Barnes, Dia Zheng et al. Aug 01, 2025 DOI: 10.1016/j.jbc.2025.110480

Stressful situations: Molecular insights on mitochondrial quality control pathways

Journal of Biological Chemistry Sabrina Romanelli, Jean-François Trempe Aug 01, 2025 DOI: 10.1016/j.jbc.2025.110483

Translation-independent association of mRNAs that encode protomers of the 5-HT2A-mGlu2 receptor complex

Journal of Biological Chemistry Somdatta Saha, Javier González-Maeso Aug 01, 2025 DOI: 10.1016/j.jbc.2025.110427

Bioluminescence-based assays for quantifying endogenous protein interactions in live cells

Journal of Biological Chemistry Andrew L. Niles, Michael R.C. Dibble, Thomas Machleidt et al. Aug 01, 2025 DOI: 10.1016/j.jbc.2025.110454

Mechanisms and regulation of DNA end resection in the maintenance of genome stability

Nature Reviews Molecular Cell Biology Raphael Ceccaldi, Petr Cejka Aug 01, 2025 DOI: 10.1038/s41580-025-00841-4

Loss of integrin alpha7-mediated signaling induces a dendritic cell-like phenotype in macrophages cultured on laminin-211/221 isoforms

Journal of Biological Chemistry Nagako Yoshiba, Tomoki Maekawa, Kiyotoshi Sekiguchi et al. Aug 01, 2025 DOI: 10.1016/j.jbc.2025.110419