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Discover research articles across all indexed journals

Biomimetic and biodegradable separator with high modulus and large ionic conductivity enables dendrite-free zinc-ion batteries

Nature Communications Hong Ma, Hongli Chen, Minfeng Chen et al. Jan 25, 2025 DOI: 10.1038/s41467-025-56325-8

CHD6 has poly(ADP-ribose)- and DNA-binding domains and regulates PARP1/2-trapping inhibitor sensitivity via abasic site repair

Nature Communications Luc Provencher, Wilson Nartey, Peter M. Brownlee et al. Jan 25, 2025 DOI: 10.1038/s41467-025-56085-5

Mechanisms of RCD-1 pore formation and membrane bending

Nature Communications Keli Ren, James Daniel Farrell, Yueyue Li et al. Jan 25, 2025 DOI: 10.1038/s41467-025-56398-5

Abstract Regulator of cell death-1 (RCD-1) governs the heteroallelic expression of RCD-1-1 and RCD-1-2, a pair of fungal gasdermin (GSDM)-like proteins, which prevent cytoplasmic mixing during allorecognition and safeguard against mycoparasitism, genome exploitation, and deleterious cytoplasmic elements (e.g., senescence plasmids) by effecting a form of cytolytic cell death. However, the underlying mechanisms by which RCD-1 acts on the cell membrane remain elusive. Here, we demonstrate that RCD-1 binds acidic lipid membranes, forms pores, and induces membrane bending. Using atomic force microscopy (AFM) and AlphaFold, we show that RCD-1-1 and RCD-1-2 form heterodimers that further self-assemble into ~14.5 nm-wide transmembrane pores (~10 heterodimers). Moreover, through AFM force spectroscopy and micropipette aspiration, we reveal that RCD-1 proteins bend membranes with low bending moduli. This combined action of pore formation and membrane deformation may constitute a conserved mechanism within the broader GSDM family.

Towards device technologies non-invasive to our daily lives

Nature Communications Hyeokjun Yoon, Canan Dagdeviren Jan 25, 2025 DOI: 10.1038/s41467-025-56423-7

Highly printable, strong, and ductile ordered intermetallic alloy

Nature Communications Yinghao Zhou, Weicheng Xiao, Dawei Wang et al. Jan 25, 2025 DOI: 10.1038/s41467-025-56355-2

Time Code for multifunctional 3D printhead controls

Nature Communications Sarah Propst, Jochen Mueller Jan 25, 2025 DOI: 10.1038/s41467-025-56140-1

Natural variation of CTB5 confers cold adaptation in plateau japonica rice

Nature Communications Haifeng Guo, Shilei Gao, Huahui Li et al. Jan 25, 2025 DOI: 10.1038/s41467-025-56174-5

Mathematical model linking telomeres to senescence in Saccharomyces cerevisiae reveals cell lineage versus population dynamics

Nature Communications Anaïs Rat, Veronica Martinez Fernandez, Marie Doumic et al. Jan 25, 2025 DOI: 10.1038/s41467-025-56196-z

Abstract Telomere shortening ultimately causes replicative senescence. However, identifying the mechanisms driving replicative senescence in cell populations is challenging due to the heterogeneity of telomere lengths and the asynchrony of senescence onset. Here, we present a mathematical model of telomere shortening and replicative senescence in Saccharomyces cerevisiae which is quantitatively calibrated and validated using data of telomerase-deficient single cells. Simulations of yeast populations, where cells with varying proliferation capacities compete against each other, show that the distribution of telomere lengths of the initial population shapes population growth, especially through the distribution of cells’ shortest telomere lengths. We also quantified how factors influencing cell viability independently of telomeres can impact senescence rates. Overall, we demonstrate a temporal evolution in the composition of senescent cell populations—from a state directly linked to critically short telomeres to a state where senescence onset becomes stochastic. This population structure may promote genome instability and facilitate senescence escape.

Serpina3k lactylation protects from cardiac ischemia reperfusion injury

Nature Communications Le Wang, Dandan Li, Fang Yao et al. Jan 25, 2025 DOI: 10.1038/s41467-024-55589-w

Supramolecular discrimination and diagnosis-guided treatment of intracellular bacteria

Nature Communications Jia-Hong Tian, Siyuan Huang, Ze-Han Wang et al. Jan 25, 2025 DOI: 10.1038/s41467-025-56308-9

Silicon-based all-solid-state batteries operating free from external pressure

Nature Communications Zhiyong Zhang, Xiuli Zhang, Yan Liu et al. Jan 25, 2025 DOI: 10.1038/s41467-025-56366-z

Abstract Silicon-based all-solid-state batteries offer high energy density and safety but face significant application challenges due to the requirement of high external pressure. In this study, a Li21Si5/Si–Li21Si5 double-layered anode is developed for all-solid-state batteries operating free from external pressure. Under the cold-pressed sintering of Li21Si5 alloys, the anode forms a top layer (Li21Si5 layer) with mixed ionic/electronic conduction and a bottom layer (Si–Li21Si5 layer) containing a three-dimensional continuous conductive network. The resultant uniform electric field at the anode|SSE interface eliminates the need for high external pressure and simultaneously enables a twofold enhancement of the lithium-ion flux at the anode interface. Such an efficient ionic/electronic transport system also facilitates the uniform release of cycling expansion stresses from the Si particles and stabilizes bulk-phase and interfacial structure of anode. Consequently, the Li21Si5/Si–Li21Si5 anode exhibited a critical current density of 10 mA cm−2 at 45 °C with a capacity of 10 mAh cm−2. And the Li21Si5/Si–Li21Si5|Li6PS5Cl|Li3InCl6|LCO cell achieve an high initial Coulombic efficiency of (97 ± 0.7)% with areal capacity of 2.8 mAh cm−2 at 0.25 mA cm−2, as well as a low expansion rate of 14.5% after 1000 cycles at 2.5 mA cm−2.

Exploring force-driven stochastic folding dynamics in mechano-responsive proteins and implications in phenotypic variation

Nature Communications Pritam Saha, Vishavdeep Vashisht, Ojas Singh et al. Jan 25, 2025 DOI: 10.1038/s41467-025-55946-3

Quasi-vertically asymmetric channels of graphene oxide membrane for ultrafast ion sieving

Nature Communications Changdao Han, Jie Jiang, Liuhua Mu et al. Jan 25, 2025 DOI: 10.1038/s41467-025-56358-z

Size-controlled assembly of phase separated protein condensates with interfacial protein cages

Nature Communications Hyeok Jin Oh, Yongsuk Lee, Haerang Hwang et al. Jan 25, 2025 DOI: 10.1038/s41467-025-56391-y

Genetic variation in IL-4 activated tissue resident macrophages determines strain-specific synergistic responses to LPS epigenetically

Nature Communications Mingming Zhao, Dragana Jankovic, Verena M. Link et al. Jan 25, 2025 DOI: 10.1038/s41467-025-56379-8

Abstract How macrophages in the tissue environment integrate multiple stimuli depends on the genetic background of the host, but this is still poorly understood. We investigate IL-4 activation of male C57BL/6 and BALB/c strain specific in vivo tissue-resident macrophages (TRMs) from the peritoneal cavity. C57BL/6 TRMs are more transcriptionally responsive to IL-4 stimulation, with induced genes associated with more super enhancers, induced enhancers, and topologically associating domains (TAD) boundaries. IL-4-directed epigenomic remodeling reveals C57BL/6 specific enrichment of NF-κB, IRF, and STAT motifs. Additionally, IL-4-activated C57BL/6 TRMs demonstrate an augmented synergistic response upon in vitro lipopolysaccharide (LPS) exposure, despite naïve BALB/c TRMs displaying a more robust transcriptional response to LPS. Single-cell RNA sequencing (scRNA-seq) analysis of mixed bone marrow chimeras indicates that transcriptional differences and synergy are cell intrinsic within the same tissue environment. Hence, genetic variation alters IL-4-induced cell intrinsic epigenetic reprogramming resulting in strain specific synergistic responses to LPS exposure.

Gate- and flux-tunable sin(2φ) Josephson element with planar-Ge junctions

Nature Communications Axel Leblanc, Chotivut Tangchingchai, Zahra Sadre Momtaz et al. Jan 25, 2025 DOI: 10.1038/s41467-025-56245-7

Fecal microbiota transplantation to prevent acute graft-versus-host disease: pre-planned interim analysis of donor effect

Nature Communications Swetha Reddi, Liliia Senyshyn, Maryam Ebadi et al. Jan 25, 2025 DOI: 10.1038/s41467-025-56375-y

Fast single atom imaging for optical lattice arrays

Nature Communications Lin Su, Alexander Douglas, Michal Szurek et al. Jan 25, 2025 DOI: 10.1038/s41467-025-56305-y

The 40S ribosomal subunit recycling complex modulates mitochondrial dynamics and endoplasmic reticulum - mitochondria tethering at mitochondrial fission/fusion hotspots

Nature Communications Foozhan Tahmasebinia, Yinglu Tang, Rushi Tang et al. Jan 25, 2025 DOI: 10.1038/s41467-025-56346-3

High-resolution fleezers reveal duplex opening and stepwise assembly by an oligomer of the DEAD-box helicase Ded1p

Nature Communications Eric M. Patrick, Rajeev Yadav, Kasun Senanayake et al. Jan 25, 2025 DOI: 10.1038/s41467-024-54955-y