Use of an artificial intelligence model to predict Ki67 from H&E-stained whole slides images in breast cancer.

D Daniel Kates-Harbeck (University Hospital LMU Munich, Otterfing, Germany) M Martin Filipits (Medical University of Vienna, Center for Cancer Research, Vienna, Austria) H Hans Heinrich Kreipe (Hannover Medical School, Institute of Pathology, Hannover, Germany) D Dominik Hlauschek (Austrian Breast and Colorectal Cancer Study Group, Wien, Austria) M Matthias Christgen (Pathology, MHH—Medizinische Hochschule Hannover, Hannover, Germany) G Gabriel Rinnerthaler O Oleg Gluz (Breast Center, Evangelisches Krankenhaus Bethesda Klinik, Moenchengladbach, Germany) S Simon Peter Gampenrieder S Sven Mahner (LMU University Hospital, Department of Obstetrics and Gynecology, Munich, Germany) K Karin Haider (Austrian Breast and Colorectal Cancer Study Group (ABCSG), Vienna, Austria) W Wolfgang Hulla R Ronald Kates (West German Study Group, Moenchengladbach, Germany) J Jingbin Zhang A Alexander Piehler (Artera, Menlo Park, CA) H Hans Pinckaers (Atera, Los Altos, CA) G Gijs Smit (Artera, Los Altos, CA) J Jacqueline R Griffin (Artera, Los Altos, CA) N Nadia Harbeck (Breast Center, Department of Obstetrics and Gynecology and Comprehensive Cancer Center Munich, Ludwig Maximilians University Munich University Hospital, Munich, Germany) M Michael Gnant (Comprehensive Cancer Center, Medical University of Vienna and Austrian Breast and Colorectal Cancer Study Group, Vienna, Austria)

Abstract

e13652 Background: Accurate assessment of Ki67 is critical for evaluating cellular proliferation and tumor aggressiveness in breast cancer diagnosis and prognosis. Traditionally, Ki67 immunohistochemistry (IHC) requires appropriate pre-analytical handling, standardized visual scoring, and experienced pathologists for correct interpretation. IHC is a laboratory-intensive procedure that can be affected by inter-observer variability (IOV) and residual heterogeneity. Methods: In this study, we introduce a novel artificial intelligence (AI) model that predicts Ki67 directly from Hematoxylin and Eosin (H&E)-stained Whole Slide Images (WSIs) in patients with hormone receptor-positive early-stage breast cancer. Our model utilizes deep-learning techniques to identify histopathological features that correlate with Ki67 in the whole tissue sample. This makes it hotspot-independent and enables accurate Ki67 predictions for heterogeneous tumor regions and a more comprehensive assessment. The AI-model was developed and validated using over 5200 patients from WSG ADAPT HR+/HER2- and PlanB trials with a 60/40 split and externally validated in ABCSG 6 (N = 1115). The primary objective of the Ki67 model is to correctly classify whether a tumor has low Ki67 (< 20%) or high Ki67 (≥20%) based on pathologist-annotated ground truth, defined as baseline Ki67 assessment by IHC. The area-under-the-curve (AUC) and associated 95%-confidence intervals (CI) were used to evaluate discrimination. To illustrate clinical utility, an exploratory decision threshold was estimated by maximizing the Youden Index in each validation dataset, providing estimates of sensitivity, specificity, positive predictive value (PPV), and negative predictive value (NPV). Results: The AI-powered Ki67 classifier model demonstrated an AUC of 0.811 (95% CI: 0.791-0.827) in the test split and 0.842 (95% CI: 0.818-0.868) in external validation. Using the exploratory optimal threshold of 0.418 in the test split, the sensitivity and specificity for determining high versus low Ki-67 expression were 77% and 70% respectively. Using the exploratory optimal threshold of 0.616 in the external validation dataset, sensitivity was 73% and specificity was 81%. In the test split and external validation dataset, the PPV was 72% and 64% respectively, and NPV was 75% and 87% respectively. Conclusions: This novel approach to classifying Ki67 directly from H&E-stained slides offers a promising automated solution to streamline diagnostic workflows and enables more accurate, reproducible Ki67 assessment. Ongoing efforts are focused on refining and validating this model to enhance its clinical utility and applicability.

Article Details

Volume / Issue Vol. 43, Issue 16_suppl
Published June 01, 2025
ISSN 0732-183X
Publisher Lippincott Williams & Wilkins

Journal Info

Journal of Clinical Oncology

Lippincott Williams & Wilkins

ISSN: 0732-183X Health Sciences

Authors (19)

D

Daniel Kates-Harbeck

University Hospital LMU Munich, Otterfing, Germany

M

Martin Filipits

Medical University of Vienna, Center for Cancer Research, Vienna, Austria

H

Hans Heinrich Kreipe

Hannover Medical School, Institute of Pathology, Hannover, Germany

D

Dominik Hlauschek

Austrian Breast and Colorectal Cancer Study Group, Wien, Austria

M

Matthias Christgen

Pathology, MHH—Medizinische Hochschule Hannover, Hannover, Germany

G

Gabriel Rinnerthaler

O

Oleg Gluz

Breast Center, Evangelisches Krankenhaus Bethesda Klinik, Moenchengladbach, Germany

S

Simon Peter Gampenrieder

S

Sven Mahner

LMU University Hospital, Department of Obstetrics and Gynecology, Munich, Germany

K

Karin Haider

Austrian Breast and Colorectal Cancer Study Group (ABCSG), Vienna, Austria

W

Wolfgang Hulla

R

Ronald Kates

West German Study Group, Moenchengladbach, Germany

J

Jingbin Zhang

A

Alexander Piehler

Artera, Menlo Park, CA

H

Hans Pinckaers

Atera, Los Altos, CA

G

Gijs Smit

Artera, Los Altos, CA

J

Jacqueline R Griffin

Artera, Los Altos, CA

N

Nadia Harbeck

Breast Center, Department of Obstetrics and Gynecology and Comprehensive Cancer Center Munich, Ludwig Maximilians University Munich University Hospital, Munich, Germany

M

Michael Gnant

Comprehensive Cancer Center, Medical University of Vienna and Austrian Breast and Colorectal Cancer Study Group, Vienna, Austria