Transferability and interpretability of vibrational normalizing-flow coordinates

E Emil Vogt (Center for Free-Electron Laser Science CFEL, Deutsches Elektronen-Synchrotron DESY 2 , Notkestr. 85, 22607 Hamburg,) Álvaro Fernández Corral (Center for Free-Electron Laser Science CFEL, Deutsches Elektronen-Synchrotron DESY 1 , Notkestr. 85, 22607 Hamburg,) Y Yahya Saleh (Center for Free-Electron Laser Science CFEL, Deutsches Elektronen-Synchrotron DESY 1 , Notkestr. 85, 22607 Hamburg,) A Andrey Yachmenev (Institute for Theoretical Chemistry, University of Stuttgart , Pfaffenwaldring 55, 70569 Stuttgart,)

Abstract

The choice of vibrational coordinates is crucial for the accuracy, efficiency, and interpretability of molecular vibrational dynamics and spectra calculations. We explore the recently proposed normalizing-flow vibrational coordinates, which are learned molecule-specific coordinate transformations optimized for a given basis set. Much like how spherical coordinates naturally simplify the hydrogen atom by embedding physical insight into the coordinate system, normalizing-flow coordinates offload complexity from the basis functions into the coordinate transformation itself. This shift not only improves basis-set convergence but also enhances the interpretability of vibrational motions. We provide an analysis of the utility, interpretation, and associated constraints of normalizing-flow vibrational coordinates. Moreover, we demonstrate that these coordinates can be generalized across different isotopologues and even structurally related molecules, achieved with minimal fine-tuning of selected output parameters.

Article Details

Volume / Issue Vol. 163, Issue 15
Published October 21, 2025
ISSN 0021-9606
Publisher American Institute of Physics

Journal Info

The Journal of Chemical Physics

American Institute of Physics

ISSN: 0021-9606 Physical Sciences

Authors (4)

E

Emil Vogt

Center for Free-Electron Laser Science CFEL, Deutsches Elektronen-Synchrotron DESY 2 , Notkestr. 85, 22607 Hamburg,

Álvaro Fernández Corral

Center for Free-Electron Laser Science CFEL, Deutsches Elektronen-Synchrotron DESY 1 , Notkestr. 85, 22607 Hamburg,

Y

Yahya Saleh

Center for Free-Electron Laser Science CFEL, Deutsches Elektronen-Synchrotron DESY 1 , Notkestr. 85, 22607 Hamburg,

A

Andrey Yachmenev

Institute for Theoretical Chemistry, University of Stuttgart , Pfaffenwaldring 55, 70569 Stuttgart,