The molecular-level diagenetic clock of sinking marine organic matter

H Heather J. Forrer (National High Magnetic Field Laboratory Geochemistry Group and Earth, Ocean, and Atmospheric Science Department, Florida State University) M Michael R. Stukel (Earth, Ocean, and Atmospheric Science Department, Florida State University) A Amy M. McKenna (National High Magnetic Field Laboratory Ion Cyclotron Resonance Facility) H Huan Chen A Amy D. Holt (National High Magnetic Field Laboratory Geochemistry Group and Earth, Ocean, and Atmospheric Science Department, Florida State University) S Sven A. Kranz (Earth, Ocean, and Atmospheric Science Department, Florida State University) R Robert G. M. Spencer

Abstract

The marine biological carbon pump is driven by sinking particulate organic matter (POM). Sinking speed and remineralization rate determine flux attenuation in the mesopelagic. Since the fate of all marine organic matter is either complete remineralization or transformation to more stable products, diagenetic modifications impact carbon dioxide sequestration time from the atmosphere. To investigate particle transformation at the molecular level, we characterize the water-extractable organic matter (WEOM) fraction of sinking particles from dominant biogeochemical environments using ultrahigh-resolution mass spectrometry. We find distinct, inverse associations in molecular-level nitrogen content and degree of transformation (i.e., “stability”) of organic matter across a productivity gradient from coastal upwelling to oligotrophic conditions. Nitrogen enrichment and low stability were observed at the coastal upwelling site and persisted to depths >400 m. Further, carbon flux is strongly correlated with the relative abundance of stable WEOM (“Island of Stability” molecular formulae) across productivity regimes and depth. This suggests emergent patterns in epi- and mesopelagic diagenesis, highlighting that the molecular composition of sinking organic matter exiting the euphotic zone varies more across regions than as a function of depth. This is attributed to highly variable sinking rates and the microbial diagenetic histories within the euphotic zone. The stability–flux relationship is considered a “diagenetic clock” relative to organic matter formation where the relative abundance of Island of Stability molecular formulae describes the degree of departure from the organic matter molecular-level composition at formation. This ubiquitous trajectory of the diagenetic clock further underpins a global ocean molecular signature of sinking POM.

Article Details

Volume / Issue Vol. 122, Issue 48
Published December 02, 2025
ISSN 0027-8424
Publisher National Academy of Sciences

Authors (7)

H

Heather J. Forrer

National High Magnetic Field Laboratory Geochemistry Group and Earth, Ocean, and Atmospheric Science Department, Florida State University

M

Michael R. Stukel

Earth, Ocean, and Atmospheric Science Department, Florida State University

A

Amy M. McKenna

National High Magnetic Field Laboratory Ion Cyclotron Resonance Facility

H

Huan Chen

A

Amy D. Holt

National High Magnetic Field Laboratory Geochemistry Group and Earth, Ocean, and Atmospheric Science Department, Florida State University

S

Sven A. Kranz

Earth, Ocean, and Atmospheric Science Department, Florida State University

R

Robert G. M. Spencer