Tandem ssDNA in neutrophil extracellular traps binds thrombin and regulates immunothrombosis

W Weijie Guo (Department of Molecular Biosciences) S Sihao Huang (Department of Biochemistry and Molecular Biology, The University of Chicago) X Xiangli Shao (Department of Chemistry) Y Yuting Wu (State Key Laboratory of Precision and Intelligent Chemistry, School of Chemistry and Materials Science, and Collaborative Innovation Center of Chemistry for Energy Materials (iChEM)) Y Yuan Ma (Beijing Advanced Innovation Center for Materials Genome Engineering, Institute for Advanced Materials and Technology) S Shuya Lu (Department of Chemistry, The University of Texas at Austin) H Hanlin Ren (Department of Chemistry, The University of Texas at Austin) X Xuening Zhou (Department of Molecular Biosciences, The University of Texas at Austin) Z Zhenglin Yang (Department of Chemistry) M Mingkuan Lyu (Department of Chemistry, The University of Texas at Austin) Y Yiwei Liu (Department of Chemistry) V Vernita Gordon (Interdisciplinary Life Sciences Graduate Programs, The University of Texas at Austin) J Jennifer S. Brodbelt T Tao Pan (Department of Biochemistry and Molecular Biology, The University of Chicago) Y Yi Lu

Abstract

Neutrophils release neutrophil extracellular traps (NETs) to neutralize infections, a process that also contributes to immunothrombosis. While beneficial in localized infections, excessive NET formation can lead to widespread coagulopathy and organ failure. While the roles of NET-associated proteins such as histones in immunothrombosis are well characterized, NET-derived DNAs are much less known. To address this issue, we report herein the direct interaction between thrombin and DNA scaffolds and further, the identification of short tandem repeats of single-stranded (ATTCC) n in NETs that selectively bind thrombin, a crucial enzyme involved in both blood clot formation and immune response. We have also developed a strategy of selective targeting ss(ATTCC) n using antisense locked nucleic acids (LNAs), effectively disrupting NET–thrombin interactions. This finding reveals an unexplored role of single strand DNA (ssDNA) within NETs and provides a broad avenue for developing targeted therapeutic interventions for immunothrombosis-related disorders.

Article Details

Volume / Issue Vol. 122, Issue 27
Published July 08, 2025
ISSN 0027-8424
Publisher National Academy of Sciences

Authors (15)

W

Weijie Guo

Department of Molecular Biosciences

S

Sihao Huang

Department of Biochemistry and Molecular Biology, The University of Chicago

X

Xiangli Shao

Department of Chemistry

Y

Yuting Wu

State Key Laboratory of Precision and Intelligent Chemistry, School of Chemistry and Materials Science, and Collaborative Innovation Center of Chemistry for Energy Materials (iChEM)

Y

Yuan Ma

Beijing Advanced Innovation Center for Materials Genome Engineering, Institute for Advanced Materials and Technology

S

Shuya Lu

Department of Chemistry, The University of Texas at Austin

H

Hanlin Ren

Department of Chemistry, The University of Texas at Austin

X

Xuening Zhou

Department of Molecular Biosciences, The University of Texas at Austin

Z

Zhenglin Yang

Department of Chemistry

M

Mingkuan Lyu

Department of Chemistry, The University of Texas at Austin

Y

Yiwei Liu

Department of Chemistry

V

Vernita Gordon

Interdisciplinary Life Sciences Graduate Programs, The University of Texas at Austin

J

Jennifer S. Brodbelt

T

Tao Pan

Department of Biochemistry and Molecular Biology, The University of Chicago

Y

Yi Lu