Sex-stratified genome-wide association meta-analysis of major depressive disorder

J Jodi T. Thomas J Jackson G. Thorp F Floris Huider P Poppy Z. Grimes R Rujia Wang P Pierre Youssef J Jonathan R. I. Coleman E Enda M. Byrne M Mark Adams B Brenda W. J. H. Penninx S Sarah E. Medland I Ian B. Hickie C Catherine M. Olsen D David C. Whiteman H Heather C. Whalley B Brenda W.J.H. Penninx H Hanna M. van Loo E Eske M. Derks T Thalia C. Eley G Gerome Breen D Dorret I. Boomsma N Naomi R. Wray N Nicholas G. Martin B Brittany L. Mitchell

Abstract

Abstract There are striking sex differences in the prevalence and symptomology of Major Depressive Disorder. Here, we conduct the largest sex-stratified genome wide association and genotype-by-sex interaction meta-analyses of Major Depressive Disorder to date (Females: 130,471 cases, 159,521 controls. Males: 64,805 cases, 132,185 controls). We identify 16 and eight independent genome-wide significant variants in females and males, respectively, including one novel variant on the X chromosome. Major Depressive Disorder in females and males shows substantial genetic overlap with a large proportion of variants displaying similar effect sizes across sexes. However, we also provide evidence for a higher burden of genetic risk in females which could be due to female-specific variants. Additionally, sex-specific pleiotropic effects may contribute to the higher prevalence of metabolic symptoms in females with Major Depressive Disorder. These findings underscore the importance of considering sex-specific genetic architectures in the study of health conditions, including Major Depressive Disorder, paving the way for more targeted treatment strategies.

Article Details

Volume / Issue Vol. 16, Issue 1
Published August 26, 2025
ISSN 2041-1723
Publisher Nature Portfolio

Journal Info

Nature Communications

Nature Portfolio

ISSN: 2041-1723 Open Access Life Sciences

Authors (24)

J

Jodi T. Thomas

J

Jackson G. Thorp

F

Floris Huider

P

Poppy Z. Grimes

R

Rujia Wang

P

Pierre Youssef

J

Jonathan R. I. Coleman

E

Enda M. Byrne

M

Mark Adams

B

Brenda W. J. H. Penninx

S

Sarah E. Medland

I

Ian B. Hickie

C

Catherine M. Olsen

D

David C. Whiteman

H

Heather C. Whalley

B

Brenda W.J.H. Penninx

H

Hanna M. van Loo

E

Eske M. Derks

T

Thalia C. Eley

G

Gerome Breen

D

Dorret I. Boomsma

N

Naomi R. Wray

N

Nicholas G. Martin

B

Brittany L. Mitchell