Predicting high-risk group according to Oncotype DX recurrence score using dynamic contrast-enhanced breast MR with temporal radiomic features.
Abstract
e12533 Background: Temporal radiomic features (TRF) extracted from dynamic contrast-enhanced breast MR (DCE-MR), which provide important information about tumor heterogeneity, offer a non-invasive approach to predict high-risk groups and could potentially serve as a cost-effective alternative to the genetic assay. This study explored how TRF from breast MR could be integrated to predict the high-risk group of OncotypeDX (ODX). Methods: In 173 patients with breast cancer [low-risk, 144 (83.2%); high-risk, 29 (16.8%)], TRF such as dynamic signal intensity changes and texture variations were derived from the imaging sequences. Hierarchical clustering was applied to reduce feature redundancy and identify significant predictors. Machine learning algorithms such as random forest, SVM, logistic regression, and KNN were utilized with 7-fold cross validation model. Results: Cross-validation revealed that models with TRF were consistently better than those without it across 4 different machine learning algorithms. Random forest AUC improved from 0.48 to 0.56, support vector machines from 0.46 to 0.63, logistic regression from 0.51 to 0.69, and K-nearest neighbors from 0.61 to 0.73 (Table). Conclusions: Incorporating TRF from DCE-MR images into a machine learning model improved the predictive performance for high-risk groups of ODX compared to using only the reference RF. Comparison of classifier performance using radiomic and temporal radiomic features. Random forest SVM Logistic regression KNN Features RF RF + TRF RF RF + TRF RF RF + TRF RF TRF AUC Fold1 0.38 (0.13, 0.65) 0.41 (0.14, 0.69) 0.68 (0.38, 0.94) 0.54 (0.23, 0.84) 0.39 (0.12, 0.71) 0.50 (0.18, 0.85) 0.60 (0.22, 0.90) 0.55 (0.27, 0.82) AUC Fold2 0.62 (0.35, 0.86) 0.52 (0.24, 0.85) 0.71 (0.45, 0.92) 0.65 (0.40, 0.87) 0.31 (0.09, 0.57) 0.55 (0.28, 0.84) 0.54 (0.29, 0.78) 0.69 (0.42, 0.91) AUC Fold3 0.57 (0.30, 0.82) 0.68 (0.38, 0.93) 0.46 (0.10, 0.75) 0.50 (0.12, 0.86) 0.49 (0.13, 0.83) 0.76 (0.53, 0.96) 0.43 (0.00, 0.82) 0.70 (0.48, 0.90) AUC Fold4 1.00 (1.00, 1.00) 0.83 (0.67, 0.96) 0.08 (0.00, 0.21) 0.79 (0.62, 0.96) 1.00 (1.00, 1.00) 1.00 (1.00, 1.00) 0.77 (0.61, 0.90) 0.75 (0.56, 0.92) AUC Fold5 0.23 (0.00, 0.50) 0.30 (0.00, 0.63) 0.83 (0.62, 0.98) 0.44 (0.13, 0.83) 0.36 (0.08, 0.62) 0.44 (0.13, 0.82) 0.62 (0.27, 0.89) 0.66 (0.46, 0.83) AUC Fold6 0.23 (0.00, 0.50) 0.66 (0.39, 0.89) 0.35 (0.00, 0.78) 0.76 (0.57, 0.95) 0.70 (0.44, 0.91) 0.70 (0.37, 1.00) 0.62 (0.13, 0.95) 0.85 (0.62, 1.00) AUC Fold7 0.35 (0.08, 0.67) 0.48 (0.14, 0.91) 0.11 (0.00, 0.32) 0.75 (0.53, 0.91) 0.33 (0.08, 0.67) 0.86 (0.68, 1.00) 0.70 (0.45, 0.90) 0.90 (0.77, 1.00) AUC Average 0.48 0.56 0.46 0.63 0.51 0.69 0.61 0.73 Data were expressed as Area Under the Curve (AUC) and 95% Confidence Intervals (CI). RF, Radiomic features; TRF, Temporal radiomic features; SVM, Support Vector Machine; KNN, K-Nearest Neighbors, AUC, Area Under the ROC Curve.
Article Details
Journal Info
Journal of Clinical Oncology
Lippincott Williams & Wilkins
Authors (10)
Jeeyeon Elizabeth Lee
Department of Surgery, Kyungpook National University Chilgok Hospital, School of Medicine, Kyungpook National University, Daegu, South Korea
Sung Joon Park
Won Hwa Kim
Jaeil Kim
Department of Life Sciences, Pohang University of Science and Technology
Byeongju Kang
Department of Surgey, Kyungpook National University Chilgok Hospital, School of Medicine, Kyungpook National University, Daegu, South Korea
Ho Yong Park
Department of Surgery, Kyungpook National University Chilgok Hospital, School of Medicine, Kyungpook National University, Daegu, South Korea
Hye Jung Kim
Department of Physics, Pusan National University 3 , Busan 46241,
Yee Soo Chae
Department of Oncology and Hematology, Kyungpook National University Chilgok Hospital, Kyungpook National University School of Medicine, Daegu, South Korea
Soo Jung Lee
In Hee Lee
Department of Oncology/Hematology, Kyungpook National University Chilgok Hospital, School of Medicine, Kyungpook National University, Daegu, South Korea