Polyketide synthase-based controlled synthesis of polycyclopropanated fuel molecules

K Kevin Yin A Alexander Landera N Namil Lee A Anthony T. Iavarone S Suzanne M. Kosina T Thomas D. Young K Kai Deng (Joint BioEnergy Institute) J Justin Baerwald Y Yan Chen J Jennifer W. Gin (Joint BioEnergy Institute) R Riley Benedict Y Yan Chiu E Ezechinyere Ukabiala M Methun Kamruzzaman K Kunal Poorey T Trent R. Northen (Joint BioEnergy Institute) C Christopher J. Petzold (Biological Systems and Engineering Division) A Anthe George P Pablo Cruz-Morales Q Qingyun Dan J Jay D. Keasling (California Institute for Quantitative Biosciences (QB3 Institute))

Abstract

Abstract Reducing carbon emissions from aviation and long-distance transportation sectors requires the development of sustainable biofuels with suitable energy density, freezing point, and other physical properties. We previously demonstrated biological production of high energy polycyclopropanated fatty acids (POP-FAs, class I) using an iterative polyketide synthase (iPKS) pathway in a Streptomyces host. Here, we used a computational model of fuel properties to identify chain length and cyclopropanation control as critical steps to engineer this iPKS for biofuel applications. We next explored the natural diversity of POP biosynthesis by investigating homologous pathways. Then, by in vivo gene exchange, we determined cyclopropanase (CP) catalysis to be key for POP-FA engineering. Leveraging both natural and engineered pathway product diversity, we demonstrate targeted production of improved POP-FAs, namely shortened POP-FAs with predicted superior freezing point properties for aviation, as well as fully cyclopropane-saturated POP-FAs which should have superior energy-density. These precise and controllable modifications to POP-FA structure open the door for bioproduction of designer POP fuels.

Article Details

Volume / Issue Vol. 17, Issue 1
Published May 27, 2026
ISSN 2041-1723
Publisher Nature Portfolio

Journal Info

Nature Communications

Nature Portfolio

ISSN: 2041-1723 Open Access Life Sciences

Authors (21)

K

Kevin Yin

A

Alexander Landera

N

Namil Lee

A

Anthony T. Iavarone

S

Suzanne M. Kosina

T

Thomas D. Young

K

Kai Deng

Joint BioEnergy Institute

J

Justin Baerwald

Y

Yan Chen

J

Jennifer W. Gin

Joint BioEnergy Institute

R

Riley Benedict

Y

Yan Chiu

E

Ezechinyere Ukabiala

M

Methun Kamruzzaman

K

Kunal Poorey

T

Trent R. Northen

Joint BioEnergy Institute

C

Christopher J. Petzold

Biological Systems and Engineering Division

A

Anthe George

P

Pablo Cruz-Morales

Q

Qingyun Dan

J

Jay D. Keasling

California Institute for Quantitative Biosciences (QB3 Institute)