Paternal SARS-CoV-2 infection impacts sperm small noncoding RNAs and increases anxiety in offspring in a sex-dependent manner

E Elizabeth A. Kleeman C Carolina Gubert S Sonali N. Reisinger K Kathryn C. Davidson D Da Lu M Merle Dayton L Liana Mackiewicz B Bethany A. Masson P Pranav Adithya A Alexandra L. Garnham G Gemma Stathatos M Moira K. O’Bryan R Rikeish R. Muralitharan F Francine Z. Marques S Shanshan Li H Huan Liao S Shae McLaughlin E Emmet T. Keough M Michelle Y. Wheeler P Pamudika Kiridena M Marcel Doerflinger M Marc Pellegrini A Anthony J. Hannan

Abstract

Abstract Given that the SARS-CoV-2 virus, and the COVID-19 pandemic, constitutes a major environmental challenge faced by billions of people worldwide, we investigated whether paternal pre-conceptual SARS-CoV-2 infection has impacts on sperm RNA content, and intergenerational (F1) and transgenerational (F2) effects on offspring phenotypes. Using an established mouse-adapted SARS-CoV-2 (P21) preclinical model, we infected adult male mice with the virus, or performed a mock control infection, and bred them with naïve female mice four weeks later, when males were no longer infectious. Here we show that offspring of infected sires display increased anxiety-like behaviors. Additionally, the F1 offspring have significant transcriptomic changes in their hippocampus. Various sperm small noncoding RNAs, including PIWI-interacting RNAs, transfer-derived RNAs and microRNAs, are differentially altered by prior paternal SARS-CoV-2 infection. Microinjection of RNA from the sperm of SARS-CoV-2 infected males into fertilized oocytes leads to a phenotype resembling that of the naturally born F1 offspring, supporting the interpretation that sperm RNAs are contributing to the outcomes of our paternal SARS-CoV-2 model. Therefore, this study provides evidence that paternal SARS-CoV-2 infection impacts sperm and affects offspring phenotypes. These findings have public-health implications and inform further research in males affected by COVID-19, and their offspring.

Article Details

Volume / Issue Vol. 16, Issue 1
Published October 11, 2025
ISSN 2041-1723
Publisher Nature Portfolio

Journal Info

Nature Communications

Nature Portfolio

ISSN: 2041-1723 Open Access Life Sciences

Authors (23)

E

Elizabeth A. Kleeman

C

Carolina Gubert

S

Sonali N. Reisinger

K

Kathryn C. Davidson

D

Da Lu

M

Merle Dayton

L

Liana Mackiewicz

B

Bethany A. Masson

P

Pranav Adithya

A

Alexandra L. Garnham

G

Gemma Stathatos

M

Moira K. O’Bryan

R

Rikeish R. Muralitharan

F

Francine Z. Marques

S

Shanshan Li

H

Huan Liao

S

Shae McLaughlin

E

Emmet T. Keough

M

Michelle Y. Wheeler

P

Pamudika Kiridena

M

Marcel Doerflinger

M

Marc Pellegrini

A

Anthony J. Hannan