Molecular structures with spectroscopic accuracy at DFT cost by the templating synthon approach and the PCS141 database

F Federico Lazzari (Scuola Superiore Meridionale 1 , Largo san Marcellino 10, 80138 Napoli,) S Silvia Di Grande (Scuola Superiore Meridionale 2 , Largo san Marcellino 10, 80138 Napoli,) L Luigi Crisci (Scuola Superiore Meridionale 2 , Largo San Marcellino 10, 80138 Napoli,) M Marco Mendolicchio (Scuola Normale Superiore 3 , piazza dei Cavalieri 7, 56125 Pisa,) V Vincenzo Barone (INSTM, via G. Giusti 9, 50121 Firenze, Italy)

Abstract

The computation of accurate geometric parameters at density functional theory cost for large molecules in the gas phase is addressed through a novel strategy that combines quantum chemical models with machine learning techniques. The first key step is the expansion of a database of accurate semi-experimental equilibrium structures with additional molecular geometries optimized by version 2 of the Pisa composite scheme. Then, the templating synthon approach is used to improve the accuracy of structures optimized by a hybrid density functional paired with a double zeta basis set, leveraging chemical similarity to cluster different molecular environments and refine bond lengths and valence angles. A set of prototypical biomolecular building blocks is used to demonstrate that it is possible to achieve spectroscopic accuracy for molecular systems too large to be treated by state-of-the-art composite wavefunction methods. In addition, a freely accessible web-based tool has been developed to facilitate the post-processing of geometries optimized using standard electronic structure codes, thereby providing an accurate and efficient tool for the computational study of medium- to large-sized molecules, also accessible to experiment-oriented researchers.

Article Details

Volume / Issue Vol. 162, Issue 11
Published March 21, 2025
ISSN 0021-9606
Publisher American Institute of Physics

Journal Info

The Journal of Chemical Physics

American Institute of Physics

ISSN: 0021-9606 Physical Sciences

Authors (5)

F

Federico Lazzari

Scuola Superiore Meridionale 1 , Largo san Marcellino 10, 80138 Napoli,

S

Silvia Di Grande

Scuola Superiore Meridionale 2 , Largo san Marcellino 10, 80138 Napoli,

L

Luigi Crisci

Scuola Superiore Meridionale 2 , Largo San Marcellino 10, 80138 Napoli,

M

Marco Mendolicchio

Scuola Normale Superiore 3 , piazza dei Cavalieri 7, 56125 Pisa,

V

Vincenzo Barone

INSTM, via G. Giusti 9, 50121 Firenze, Italy