Modulating antigen processing through metal–organic frameworks to bias adaptive immunity

E Ezra Cho (Department of Biomedical Engineering, Boston University) M Meredith A. Davis (Department of Biomedical Engineering, Boston University) J Julia A. Nowak (Department of Biomedical Engineering, Boston University) M Mayayi Izzo (Department of Biomedical Engineering, Boston University) A Anna Maria Ferrante (Department of Biomedical Engineering, Boston University) F Fanrui Sha (Department of Chemistry, Northwestern University) J Julian S. Magdalenski (Department of Chemistry) O Omar K. Farha (Department of Chemistry) M Michelle H. Teplensky (Department of Biomedical Engineering, Boston University)

Abstract

Vaccines induce specific immunity through antigen uptake and processing. However, while nanoparticle vaccines have elevated uptake, the impact of intracellular protein release and how this affects processing and downstream responses are not fully understood. Herein, we reveal how tuning unmodified antigen release rate, specifically through modulation of metal–organic framework (MOF) pore size, influences the type and extent of raised adaptive immunity. We use two MOFs in the NU-100x series with 1.4 nm difference in pore diameter, employ facile postsynthesis loading to achieve significant internalization of model protein antigen ovalbumin ( ca. 1.4 mg/mg), and observe distinct antigen release and intracellular processing profiles influenced by MOF pore size. We investigate how this difference in release biases downstream CD8 + , T H 1, and T H 2 T cell responses. Ovalbumin-loaded NU-1003 induced 1.8-fold higher CD8 + :CD4 + T cell proliferation ratio and displayed 2.2-fold greater ratio of CD4 + T H 1:T H 2 cytokines compared to ovalbumin-loaded NU-1000. Antigen released from NU-1000 in vivo exhibited stronger antigen-specific IgG responses, which is dependent on CD4 + T cells (up to ninefold stronger long-term antibody production and 5.9-fold higher IgG1:IgG2a ratio), compared to NU-1003. When translated to wild-type SARS-CoV-2 receptor-binding domain (RBD) protein, RBD-loaded NU-1000 induced 60.5-fold higher IgG1:IgG2a compared to NU-1003. Wild-type RBD-loaded NU-1000 immunization also induced a greater breadth of epitope recognition compared to NU-1003, as evidenced by increased binding antibodies to the Omicron RBD variant. Overall, this work highlights how antigen release significantly influences immunity induced by vaccines and offers a path to employ unmodified antigen release kinetics to drive personalized protective responses.

Article Details

Volume / Issue Vol. 122, Issue 45
Published November 11, 2025
ISSN 0027-8424
Publisher National Academy of Sciences

Authors (9)

E

Ezra Cho

Department of Biomedical Engineering, Boston University

M

Meredith A. Davis

Department of Biomedical Engineering, Boston University

J

Julia A. Nowak

Department of Biomedical Engineering, Boston University

M

Mayayi Izzo

Department of Biomedical Engineering, Boston University

A

Anna Maria Ferrante

Department of Biomedical Engineering, Boston University

F

Fanrui Sha

Department of Chemistry, Northwestern University

J

Julian S. Magdalenski

Department of Chemistry

O

Omar K. Farha

Department of Chemistry

M

Michelle H. Teplensky

Department of Biomedical Engineering, Boston University