Machine learning for microscopy data analytics targeting real-time optical characterization of semiconductor nanocrystals

A Amitrajit Mukherjee (Department of Chemistry, KU Leuven, Celestijnenlaan 200F, 3001 Heverlee, Belgium) R Robby Reynaerts B Bapi Pradhan (Department of Chemistry, KU Leuven, Celestijnenlaan 200F, 3001 Heverlee, Belgium) S Sudipta Seth A Andreas T. Rösch T Tamali Banerjee L Lata Chouhan H Handong Jin C Christian Sternemann (Fakultät Physik/DELTA) M Michael Paulus (Fakultät Physik/DELTA) L Luca Leoncino K Kunal S. Mali (Division of Molecular Imaging and Photonics, Department of Chemistry) S Steven De Feyter (Division of Molecular Imaging and Photonics, Department of Chemistry) M Maarten B. J. Roeffaers (cMACS, Department of Microbial and Molecular Systems, KU Leuven, Celestijnenlaan 200F, Leuven 3001, Belgium) E E. W. Meijer (Institute for Complex Molecular Systems and Laboratory of Macromolecular and Organic Chemistry) J Johan Hofkens (Department of Chemistry, KU Leuven, Celestijnenlaan 200F, B-3001 Leuven, Belgium) E Elke Debroye (Department of Chemistry, KU Leuven, Celestijnenlaan 200F, 3001 Heverlee, Belgium)

Abstract

Abstract Semiconductor nanocrystals with uniform morphology and composition are expected to show consistent responses during light-matter interactions. However, microscopy reveals significant variations in their photoluminescence blinking patterns, even under identical experimental conditions. This discrepancy arises from differences in crystal defects and nonradiative trap states. As a result, heterogeneous blinking patterns serve as valuable indicator of material quality, uncovering several concealed features through statistical analysis of large datasets. Nonetheless, efficient segregation and analysis of numerous blinking trajectories remain a challenge due to laborious calculations, computational bottlenecks, and manual intervention. In this study, we introduce a robust unsupervised machine learning (UML) assisted module to cluster high-dimensional blinking patterns in near-real-time, while calculating category-wise power spectral densities (PSD) to investigate active traps. Furthermore, we explore the impact of data preprocessing on clustering performance. The ‘clustering-segregation-analysis’ (UML-PSD) methodology demonstrates versatility, paving a way to advance contemporary (micro)spectroscopy, specifically for rapid and cost-effective optical characterization of semiconductor nanocrystals.

Article Details

Volume / Issue Vol. 17, Issue 1
Published February 04, 2026
ISSN 2041-1723
Publisher Nature Portfolio

Journal Info

Nature Communications

Nature Portfolio

ISSN: 2041-1723 Open Access Life Sciences

Authors (17)

A

Amitrajit Mukherjee

Department of Chemistry, KU Leuven, Celestijnenlaan 200F, 3001 Heverlee, Belgium

R

Robby Reynaerts

B

Bapi Pradhan

Department of Chemistry, KU Leuven, Celestijnenlaan 200F, 3001 Heverlee, Belgium

S

Sudipta Seth

A

Andreas T. Rösch

T

Tamali Banerjee

L

Lata Chouhan

H

Handong Jin

C

Christian Sternemann

Fakultät Physik/DELTA

M

Michael Paulus

Fakultät Physik/DELTA

L

Luca Leoncino

K

Kunal S. Mali

Division of Molecular Imaging and Photonics, Department of Chemistry

S

Steven De Feyter

Division of Molecular Imaging and Photonics, Department of Chemistry

M

Maarten B. J. Roeffaers

cMACS, Department of Microbial and Molecular Systems, KU Leuven, Celestijnenlaan 200F, Leuven 3001, Belgium

E

E. W. Meijer

Institute for Complex Molecular Systems and Laboratory of Macromolecular and Organic Chemistry

J

Johan Hofkens

Department of Chemistry, KU Leuven, Celestijnenlaan 200F, B-3001 Leuven, Belgium

E

Elke Debroye

Department of Chemistry, KU Leuven, Celestijnenlaan 200F, 3001 Heverlee, Belgium