Higher-order transient membrane protein structures

Y Yuxi Zhang (Shanghai Key Laboratory of Anesthesiology and Brain Functional Modulation, Clinical Research Center for Anesthesiology and Perioperative Medicine, Translational Research Institute of Brain and Brain-Like Intelligence, Shanghai Fourth People’s Hospital, School of Medicine, Tongji University) H Hisham Mazal (Max Planck Institute for the Science of Light) V Venkata Shiva Mandala (Laboratory of Molecular Neurobiology and Biophysics, The Rockefeller University) G Gonzalo Pérez-Mitta (Laboratory of Molecular Neurobiology and Biophysics, The Rockefeller University) V Vahid Sondoghdar (Max Planck Institute for the Science of Light) C Christoph A. Haselwandter (Department of Physics and Astronomy, University of Southern California) R Roderick MacKinnon (Laboratory of Molecular Neurobiology and Biophysics, HHMI, The Rockefeller University)

Abstract

This study shows that five membrane proteins—three GPCRs, an ion channel, and an enzyme—form self-clusters under natural expression levels in a cardiac-derived cell line. The cluster size distributions imply that these proteins self-oligomerize reversibly through weak interactions. When the concentration of the proteins is increased through heterologous expression, the cluster size distributions approach a critical distribution at which point a phase transition occurs, yielding larger bulk phase clusters. A thermodynamic model like that explaining micellization of amphiphiles and lipid membrane formation accounts for this behavior. We propose that many membrane proteins exist as oligomers that form through weak interactions, which we call higher-order transient structures (HOTS). The key characteristics of HOTS are transience, molecular specificity, and a monotonically decreasing size distribution that may become critical at high concentrations. Because molecular specificity invokes self-recognition through protein sequence and structure, we propose that HOTS are genetically encoded supramolecular units.

Article Details

Volume / Issue Vol. 122, Issue 1
Published January 07, 2025
ISSN 0027-8424
Publisher National Academy of Sciences

Authors (7)

Y

Yuxi Zhang

Shanghai Key Laboratory of Anesthesiology and Brain Functional Modulation, Clinical Research Center for Anesthesiology and Perioperative Medicine, Translational Research Institute of Brain and Brain-Like Intelligence, Shanghai Fourth People’s Hospital, School of Medicine, Tongji University

H

Hisham Mazal

Max Planck Institute for the Science of Light

V

Venkata Shiva Mandala

Laboratory of Molecular Neurobiology and Biophysics, The Rockefeller University

G

Gonzalo Pérez-Mitta

Laboratory of Molecular Neurobiology and Biophysics, The Rockefeller University

V

Vahid Sondoghdar

Max Planck Institute for the Science of Light

C

Christoph A. Haselwandter

Department of Physics and Astronomy, University of Southern California

R

Roderick MacKinnon

Laboratory of Molecular Neurobiology and Biophysics, HHMI, The Rockefeller University