Herpes simplex virus 1 harboring poly(T) DNA sequences as a key ligand for AIM2 inflammasome activation and host defense

S SuHyeon Oh J Jueun Oh K Kyeongchan Im T Tae Hyoung Kim J Jihye Lee K Kihye Shin N Nabukenya Mariam C Cheong Seok J Jaewoo Park G GyeongJu Yu H Hayeon Kim S Suhyun Kim S Seyun Shin J Jinwoo Gil S Sehee Park Y Yoon-Seok Chung D Daesik Kim Y Young Ki Choi E Eui Tae Kim J Joo Sang Lee S Sangjoon Lee (Department of Applied Physics and Applied Mathematics)

Abstract

Abstract Herpes simplex virus type 1 (HSV-1) infection remains a major global health challenge, yet the mechanisms underlying strain-specific innate immune responses are poorly understood. Here, we show that distinct HSV-1 strains differentially activate the absent in melanoma 2 (AIM2) inflammasome. The HF strain robustly induces AIM2-dependent inflammasome activation, whereas the F and KOS strains elicit minimal responses despite comparable infection efficiency. We demonstrate that this difference is driven by viral genomic features rather than replication capacity. Genomic analyses identify a poly(T) DNA sequence within the UL25-UL26 intergenic region that is enriched in the HF strain. Deletion of a 14-mer poly(T) sequence markedly impairs inflammasome activation, cytokine release, and host protection in vivo, whereas introduction of a poly(T) tract into the F strain is sufficient to confer AIM2 activation and enhanced host defense. Furthermore, poly(T)-mediated AIM2 activation is length-dependent, conserved in human macrophages, and requires a cGAS-STING-IRF1 licensing axis. Together, these findings identify viral poly(T) DNA as a key determinant of strain-specific AIM2 inflammasome activation and reveal how viral genomic variation shapes innate immune recognition.

Article Details

Volume / Issue Vol. 17, Issue 1
Published April 13, 2026
ISSN 2041-1723
Publisher Nature Portfolio

Journal Info

Nature Communications

Nature Portfolio

ISSN: 2041-1723 Open Access Life Sciences

Authors (21)

S

SuHyeon Oh

J

Jueun Oh

K

Kyeongchan Im

T

Tae Hyoung Kim

J

Jihye Lee

K

Kihye Shin

N

Nabukenya Mariam

C

Cheong Seok

J

Jaewoo Park

G

GyeongJu Yu

H

Hayeon Kim

S

Suhyun Kim

S

Seyun Shin

J

Jinwoo Gil

S

Sehee Park

Y

Yoon-Seok Chung

D

Daesik Kim

Y

Young Ki Choi

E

Eui Tae Kim

J

Joo Sang Lee

S

Sangjoon Lee

Department of Applied Physics and Applied Mathematics