GenSym: A tool for random symmetric structure generation and its application in crystal structure prediction software
Abstract
Crystal structure prediction (CSP) methods have become essential tools in materials discovery. As the initial step in CSP, the quality of the generated structures critically determines efficiency. It has been increasingly recognized that incorporating symmetry during structure generation can significantly enhance efficiency, as most real materials crystallize in non-P1 symmetries. In this work, we present an open-source package for random symmetric structure generation under user-defined constraints. The program supports bulk, low-dimensional, and molecular crystal generation, with flexible control over parameters such as cell shape, bond length, conventional or primitive symmetry settings, Wyckoff position weighting, and density uniformity adjustment. Furthermore, it interfaces with prototype databases, enabling structure generation based on known prototypes. We demonstrate that its integration with CSP frameworks substantially improves search efficiency, offering strong potential for accelerating novel materials design and discovery.
Article Details
Journal Info
The Journal of Chemical Physics
American Institute of Physics
Authors (8)
Yu Han
Chi Ding
Department of Physics, Nanjing University
Shaobo Yu
Zhennan Zhang
National Laboratory of Solid State Microstructures, School of Physics and Collaborative Innovation Center of Advanced Microstructures, Nanjing University 1 , Nanjing 210093,
Junjie Wang
State Key Laboratory of Quantum Functional Materials, School of Physical Science and Technology
Qiuhan Jia
Hao Gao
Institute of Traditional Chinese Medicine and Natural Products, College of Pharmacy/State Key Laboratory of Bioactive Molecules and Druggability Assessment/International Cooperative Laboratory of Traditional Chinese Medicine Modernization and Innovative Drug Development of Chinese Ministry of Education of China/Guangdong Province Key Laboratory of Pharmacodynamic Constituents of TCM and New Drugs Research
Jian Sun