Fine-tuning universal machine-learned interatomic potentials: A Tutorial on methods and applications

X Xiaoqing Liu (School of Chemical Engineering and Light Industry) K Kehan Zeng (Shanghai Jiao Tong University-Chongqing Institute of Artificial Intelligence 2 , Chongqing 401329,) Z Zedong Luo (Shanghai Jiao Tong University-Chongqing Institute of Artificial Intelligence 2 , Chongqing 401329,) Y Yangshuai Wang (Mathematics Department, University of British Columbia 25 , 1984 Mathematics Rd., Vancouver, British Columbia V6T 1Z2,) T Teng Zhao Z Zhenli Xu (School of Mathematical Sciences, Shanghai Jiao Tong University 2 , Shanghai 200240,)

Abstract

Universal machine-learned interatomic potentials (U-MLIPs) have demonstrated broad applicability across diverse atomistic systems but often require fine-tuning to achieve task-specific accuracy. While the number of available U-MLIPs and their fine-tuning applications are rapidly expanding, there remains a lack of systematic guidance on how to effectively fine-tune these models. This Tutorial provides a comprehensive, step-by-step guide to fine-tuning U-MLIPs for computational materials modeling. Using the recently released MACE-MP-0 as a representative foundation model, we illustrate the full workflow of data set preparation, hyperparameter selection, model training, and validation. Beyond methodological guidance, we conduct systematic case studies on solid-state electrolytes, stacking fault defects in metals, semiconductors, solid–liquid interfacial interactions in low-dimensional systems, and more complicated heterointerfaces. These examples demonstrate that fine-tuning substantially improves predictive accuracy while maintaining affordable computational cost, accelerates training convergence, enhances out-of-distribution generalization, and achieves superior data efficiency. Remarkably, fine-tuned foundation models can even capture aspects of long-range physics without explicit corrections. Together, these results highlight that fine-tuning not only provides a practical recipe for applying U-MLIPs but also offers new insights into their physical fidelity and potential for advancing large-scale atomistic simulations. To support practical applications, we include code examples that enable researchers, particularly those new to the field, to efficiently incorporate fine-tuned U-MLIPs into their workflows.

Article Details

Volume / Issue Vol. 139, Issue 4
Published January 28, 2026
ISSN 0021-8979
Publisher American Institute of Physics

Journal Info

Journal of Applied Physics

American Institute of Physics

ISSN: 0021-8979 Physical Sciences

Authors (6)

X

Xiaoqing Liu

School of Chemical Engineering and Light Industry

K

Kehan Zeng

Shanghai Jiao Tong University-Chongqing Institute of Artificial Intelligence 2 , Chongqing 401329,

Z

Zedong Luo

Shanghai Jiao Tong University-Chongqing Institute of Artificial Intelligence 2 , Chongqing 401329,

Y

Yangshuai Wang

Mathematics Department, University of British Columbia 25 , 1984 Mathematics Rd., Vancouver, British Columbia V6T 1Z2,

T

Teng Zhao

Z

Zhenli Xu

School of Mathematical Sciences, Shanghai Jiao Tong University 2 , Shanghai 200240,