Epiregulon: Single-cell transcription factor activity inference to predict drug response and drivers of cell states

T Tomasz Włodarczyk A Aaron Lun D Diana Wu (Department of Molecular Discovery and Cancer Cell Biology, Genentech) M Minyi Shi (Department of Genetics, Stanford School of Medicine, Stanford, CA, USA.) X Xiaofen Ye S Shreya Menon S Shushan Toneyan K Kerstin Seidel L Liang Wang J Jenille Tan S Shang-Yang Chen T Timothy Keyes A Aleksander Chlebowski A Adrian Waddell W Wei Zhou Y Yangmeng Wang Q Qiuyue Yuan Y Yu Guo L Liang-Fu Chen B Bence Daniel (Department of Pathology, Stanford University) A Antonina Hafner M Meng He (European Synchrotron Radiation Facility) A Alejandro Chibly Y Yuxin Liang Z Zhana Duren C Ciara Metcalfe M Marc Hafner C Christian W. Siebel M M. Ryan Corces R Robert Yauch S Shiqi Xie (Department of Molecular Discovery and Cancer Cell Biology, Genentech) X Xiaosai Yao

Article Details

Volume / Issue Vol. 16, Issue 1
Published August 02, 2025
ISSN 2041-1723
Publisher Nature Portfolio

Journal Info

Nature Communications

Nature Portfolio

ISSN: 2041-1723 Open Access Life Sciences

Authors (32)

T

Tomasz Włodarczyk

A

Aaron Lun

D

Diana Wu

Department of Molecular Discovery and Cancer Cell Biology, Genentech

M

Minyi Shi

Department of Genetics, Stanford School of Medicine, Stanford, CA, USA.

X

Xiaofen Ye

S

Shreya Menon

S

Shushan Toneyan

K

Kerstin Seidel

L

Liang Wang

J

Jenille Tan

S

Shang-Yang Chen

T

Timothy Keyes

A

Aleksander Chlebowski

A

Adrian Waddell

W

Wei Zhou

Y

Yangmeng Wang

Q

Qiuyue Yuan

Y

Yu Guo

L

Liang-Fu Chen

B

Bence Daniel

Department of Pathology, Stanford University

A

Antonina Hafner

M

Meng He

European Synchrotron Radiation Facility

A

Alejandro Chibly

Y

Yuxin Liang

Z

Zhana Duren

C

Ciara Metcalfe

M

Marc Hafner

C

Christian W. Siebel

M

M. Ryan Corces

R

Robert Yauch

S

Shiqi Xie

Department of Molecular Discovery and Cancer Cell Biology, Genentech

X

Xiaosai Yao