Engineering of ATP synthase for enhancement of proton-to-ATP ratio

H Hiroshi Ueno (Department of Applied Chemistry, Graduate School of Engineering) K Kiyoto Yasuda N Norie Hamaguchi-Suzuki R Riku Marui N Naruhiko Adachi (Life Science Center for Survival Dynamics (TARA)) T Toshiya Senda T Takeshi Murata (Department of Chemistry, Graduate School of Science) H Hiroyuki Noji

Abstract

Abstract F o F 1 -ATP synthase (F o F 1 ) interconverts the energy of the proton motive force ( pmf ) and that of ATP through the mechanical rotation. The H + /ATP ratio, one of the most crucial parameters in bioenergetics, varies among species due to differences in the number of H + -binding c-subunits, resulting in H + /ATP ratios ranging from 2.7 to 5. In this study, we seek to significantly enhance the H + /ATP ratio by employing an alternative approach that differs from that of nature. We engineer F o F 1 to form multiple peripheral stalks, each bound to a proton-conducting a-subunit. The engineered F o F 1 exhibits an H + /ATP ratio of 5.8, surpassing the highest ratios found in naturally occurring F o F 1 s, enabling ATP synthesis under low pmf conditions where wild-type enzymes cannot synthesize ATP. Structural analysis reveals that the engineered F o F 1 forms up to three peripheral stalks and a-subunits. This study not only provides valuable insights into the H + -transport mechanism of F o F 1 but also opens up possibilities for engineering the foundation of cellular bioenergetics.

Article Details

Volume / Issue Vol. 16, Issue 1
Published July 03, 2025
ISSN 2041-1723
Publisher Nature Portfolio

Journal Info

Nature Communications

Nature Portfolio

ISSN: 2041-1723 Open Access Life Sciences

Authors (8)

H

Hiroshi Ueno

Department of Applied Chemistry, Graduate School of Engineering

K

Kiyoto Yasuda

N

Norie Hamaguchi-Suzuki

R

Riku Marui

N

Naruhiko Adachi

Life Science Center for Survival Dynamics (TARA)

T

Toshiya Senda

T

Takeshi Murata

Department of Chemistry, Graduate School of Science

H

Hiroyuki Noji