Design and implementation of aerobic and ambient CO2-reduction as an entry-point for enhanced carbon fixation

A Ari Satanowski D Daniel G. Marchal A Alain Perret J Jean-Louis Petit M Madeleine Bouzon V Volker Döring I Ivan Dubois H Hai He E Edward N. Smith V Virginie Pellouin H Henrik M. Petri V Vittorio Rainaldi M Maren Nattermann S Simon Burgener N Nicole Paczia (Core Facility for Metabolomics and Small Molecule Mass Spectrometry) J Jan Zarzycki M Matthias Heinemann A Arren Bar-Even T Tobias J. Erb (Department of Biochemistry and Synthetic Metabolism, Max Planck Institute for Terrestrial Microbiology)

Abstract

Abstract The direct reduction of CO2 into one-carbon molecules is key to highly efficient biological CO2-fixation. However, this strategy is currently restricted to anaerobic organisms and low redox potentials. In this study, we introduce the CORE cycle, a synthetic metabolic pathway that converts CO2 to formate at aerobic conditions and ambient CO2 levels, using only NADPH as a reductant. Combining theoretical pathway design and analysis, enzyme bioprospecting and high-throughput screening, modular assembly and adaptive laboratory evolution, we realize the CORE cycle in vivo and demonstrate that the cycle supports growth of E. coli by supplementing C1-metabolism and serine biosynthesis from CO2. We further analyze the theoretical potential of the CORE cycle as a new entry-point for carbon in photorespiration and autotrophy. Overall, our work expands the solution space for biological carbon reduction, offering a promising approach to enhance CO2 fixation processes such as photosynthesis, and opening avenues for synthetic autotrophy.

Article Details

Volume / Issue Vol. 16, Issue 1
Published April 01, 2025
ISSN 2041-1723
Publisher Nature Portfolio

Journal Info

Nature Communications

Nature Portfolio

ISSN: 2041-1723 Open Access Life Sciences

Authors (19)

A

Ari Satanowski

D

Daniel G. Marchal

A

Alain Perret

J

Jean-Louis Petit

M

Madeleine Bouzon

V

Volker Döring

I

Ivan Dubois

H

Hai He

E

Edward N. Smith

V

Virginie Pellouin

H

Henrik M. Petri

V

Vittorio Rainaldi

M

Maren Nattermann

S

Simon Burgener

N

Nicole Paczia

Core Facility for Metabolomics and Small Molecule Mass Spectrometry

J

Jan Zarzycki

M

Matthias Heinemann

A

Arren Bar-Even

T

Tobias J. Erb

Department of Biochemistry and Synthetic Metabolism, Max Planck Institute for Terrestrial Microbiology