Cross-population GWAS and proteomics improve risk prediction and reveal mechanisms in atrial fibrillation

S Shuai Yuan (State Key Laboratory of Coordination Chemistry, Key Laboratory of Mesoscopic Chemistry of MOE, Jiangsu Key Laboratory of Advanced Organic Materials, School of Chemistry and Chemical Engineering) J Jie Chen X Xixin Ruan Y Yuying Li S Sarah A. Abramowitz L Lijuan Wang F Fangyuan Jiang Y Ying Xiong M Michael G. Levin B Benjamin F. Voight (Department of Genetics, Perelman School of Medicine, University of Pennsylvania) D Dipender Gill S Stephen Burgess A Agneta Åkesson K Karl Michaëlsson X Xue Li S Scott M. Damrauer S Susanna C. Larsson

Abstract

Abstract Atrial fibrillation (AF) is a common cardiac arrhythmia with strong genetic components, yet its underlying molecular mechanisms and potential therapeutic targets remain incompletely understood. We conducted a cross-population genome-wide meta-analysis of 252,438 AF cases and identified 525 loci that met genome-wide significance. Two loci of PITX2 and ZFHX3 genes were identified as shared across populations of different ancestries. Comprehensive gene prioritization approaches reinforced the role of muscle development and heart contraction while also uncovering additional pathways, including cellular response to transforming growth factor-beta. Population-specific genetic correlations uncovered common and unique circulatory comorbidities between Europeans and Africans. Mendelian randomization identified modifiable risk factors and circulating proteins, informing disease prevention and drug development. Integrating genomic data from this cross-population genome-wide meta-analysis with proteomic profiling significantly enhanced AF risk prediction. This study advances our understanding of the genetic etiology of AF while also enhancing risk prediction, prevention strategies, and therapeutic development.

Article Details

Volume / Issue Vol. 16, Issue 1
Published July 11, 2025
ISSN 2041-1723
Publisher Nature Portfolio

Journal Info

Nature Communications

Nature Portfolio

ISSN: 2041-1723 Open Access Life Sciences

Authors (17)

S

Shuai Yuan

State Key Laboratory of Coordination Chemistry, Key Laboratory of Mesoscopic Chemistry of MOE, Jiangsu Key Laboratory of Advanced Organic Materials, School of Chemistry and Chemical Engineering

J

Jie Chen

X

Xixin Ruan

Y

Yuying Li

S

Sarah A. Abramowitz

L

Lijuan Wang

F

Fangyuan Jiang

Y

Ying Xiong

M

Michael G. Levin

B

Benjamin F. Voight

Department of Genetics, Perelman School of Medicine, University of Pennsylvania

D

Dipender Gill

S

Stephen Burgess

A

Agneta Åkesson

K

Karl Michaëlsson

X

Xue Li

S

Scott M. Damrauer

S

Susanna C. Larsson