Biomarkers of response to neoadjuvant palbociclib plus anastrozole in endocrine-resistant estrogen receptor-positive/HER2-negative breast cancer: a phase 2 trial

T Tim Kong A Alex Mabry M Maureen Highkin A Anthony Z. Wang J Jeremy Hoog Z Zhanfang Guo A Adrian Gonzales-Gonzales S Shana Thomas Y Yingduo Song F Feng Gao M Mateusz Opyrchal L Lindsay Peterson F Foluso Ademuyiwa J Julie Margenthaler R Rebecca Aft K Katherine Glover-Collins L Leslie Nehring Y Yu Tao S Souzan Sanati I Ian S. Hagemann F Fouad Boulos M Matthew Holt L Li Ding W Wenge Zhu S Stephen T. Oh J Jianxin Wang A Agnieszka K. Witkiewicz E Erik S. Knudsen R Ron Bose J Jason D. Weber M Matthew Goetz D Donald Northfelt J Jingqin Luo C Cynthia X. Ma

Abstract

Abstract CDK4/6 inhibitors (CDK4/6i) improve outcomes for estrogen receptor (ER) positive/HER2-negative breast cancers (BCs), yet intrinsic and acquired resistance exist. Here, we evaluated anastrozole in combination with palbociclib (ANA/PAL) in the NeoPalAna Endocrine-Resistant cohort (NCT01723774). Thirty-four patients with clinical stage II/III ER + /HER2– BCs resistant to standard neoadjuvant endocrine therapy (on-treatment Ki67 > 10%) received neoadjuvant ANA/PAL, with serial biopsies analyzed. The primary endpoint, complete cell cycle arrest (CCCA; Ki67 C1D15  ≤ 2.7% at cycle 1, day 15), was achieved in 57.6% of patients (95%CI: 39.2–74.5%). Resistance to ANA/PAL (Ki67 C1D15  > 10%) was associated with higher pre-treatment tumor grade, Ki67, and specific PAM50 subtypes. Resistant tumors demonstrated reduced ER signaling and upregulation of cell cycle, mTOR, interferon, JAK/STAT, and immune checkpoints. Additionally, a 33-gene signature that predicted neoadjuvant Ki67 response to ANA/PAL was prognostic in a metastatic validation cohort. These findings underscore dysregulated oncogenic pathways as potential resistance mechanisms and biomarkers of response to CDK4/6i.

Article Details

Volume / Issue Vol. 17, Issue 1
Published January 27, 2026
ISSN 2041-1723
Publisher Nature Portfolio

Journal Info

Nature Communications

Nature Portfolio

ISSN: 2041-1723 Open Access Life Sciences

Authors (34)

T

Tim Kong

A

Alex Mabry

M

Maureen Highkin

A

Anthony Z. Wang

J

Jeremy Hoog

Z

Zhanfang Guo

A

Adrian Gonzales-Gonzales

S

Shana Thomas

Y

Yingduo Song

F

Feng Gao

M

Mateusz Opyrchal

L

Lindsay Peterson

F

Foluso Ademuyiwa

J

Julie Margenthaler

R

Rebecca Aft

K

Katherine Glover-Collins

L

Leslie Nehring

Y

Yu Tao

S

Souzan Sanati

I

Ian S. Hagemann

F

Fouad Boulos

M

Matthew Holt

L

Li Ding

W

Wenge Zhu

S

Stephen T. Oh

J

Jianxin Wang

A

Agnieszka K. Witkiewicz

E

Erik S. Knudsen

R

Ron Bose

J

Jason D. Weber

M

Matthew Goetz

D

Donald Northfelt

J

Jingqin Luo

C

Cynthia X. Ma