Atlas of proteomic signatures of brain structure and its links to brain disorders

P Peng Ren X Xiao-He Hou Z Zeyu Li (Beijing National Laboratory for Molecular Sciences) J Jia You Y Yuzhu Li W Wei Zhang W Weikang Gong B Bei Zhang B Bangsheng Wu L Linbo Wang C Chun Shen (National Key Laboratory of Mechanics and Control for Aerospace Structures and Key Laboratory for Intelligent Nano Materials and Devices of the Ministry of Education, Institute for Frontier Science) Y Yujie Zhao (Department of Chemistry) Q Qing Ma (DND-CAT, Synchrotron Research Center, Northwestern University, Evanston, Illinois 60208, United States) J Jujiao Kang Y Yuchao Jiang N Neil Roberts F Fan Xu (CAS Key Laboratory of Colloid, Interface and Thermodynamics) Y Yong He (Department of Pathogen Biology, School of Basic Medical Sciences, Anhui Medical University) J Jin-Tai Yu (Department of Neurology and National Center for Neurological Disorders, Huashan Hospital, Fudan University) M Meiyun Wang W Wei Cheng

Abstract

Abstract Individual variation in brain structure influences deterioration due to disease and comprehensive profiling of the associated proteomic signature advances mechanistic understanding. Here, using data from 4997 UK Biobank participants, we analyzed the associations between 2920 plasma proteins and 272 neuroimaging-derived brain structure measures. We identified 5358 associations between 1143 proteins and 256 brain structure measures, with NCAN and LEP proteins showing the most associations. Functional enrichment implicated these proteins in neurogenesis, immune/apoptotic processes and neurons. Furthermore, bidirectional Mendelian randomization revealed 33 associations between 32 proteins and 23 brain structure measures, and 21 associations between nine brain structure associated proteins and ten brain disorders. Moreover, the significant associations between the identified proteins and mental health were mediated by brain volume and surface area. In summary, this study generates a comprehensive atlas mapping the patterns of association between proteome and brain structure, highlighting their potential value for studying brain disorders.

Article Details

Volume / Issue Vol. 16, Issue 1
Published June 02, 2025
ISSN 2041-1723
Publisher Nature Portfolio

Journal Info

Nature Communications

Nature Portfolio

ISSN: 2041-1723 Open Access Life Sciences

Authors (21)

P

Peng Ren

X

Xiao-He Hou

Z

Zeyu Li

Beijing National Laboratory for Molecular Sciences

J

Jia You

Y

Yuzhu Li

W

Wei Zhang

W

Weikang Gong

B

Bei Zhang

B

Bangsheng Wu

L

Linbo Wang

C

Chun Shen

National Key Laboratory of Mechanics and Control for Aerospace Structures and Key Laboratory for Intelligent Nano Materials and Devices of the Ministry of Education, Institute for Frontier Science

Y

Yujie Zhao

Department of Chemistry

Q

Qing Ma

DND-CAT, Synchrotron Research Center, Northwestern University, Evanston, Illinois 60208, United States

J

Jujiao Kang

Y

Yuchao Jiang

N

Neil Roberts

F

Fan Xu

CAS Key Laboratory of Colloid, Interface and Thermodynamics

Y

Yong He

Department of Pathogen Biology, School of Basic Medical Sciences, Anhui Medical University

J

Jin-Tai Yu

Department of Neurology and National Center for Neurological Disorders, Huashan Hospital, Fudan University

M

Meiyun Wang

W

Wei Cheng