Acute chromatin decompaction stiffens the nucleus as revealed by nanopillar-induced nuclear deformation in cells

A Aninda Mitra (School of Chemistry, Chemical Engineering and Biotechnology, Nanyang Technological University) M Marie F. A. Cutiongco (School of Chemistry, Chemical Engineering and Biotechnology, Nanyang Technological University) R Romina Burla (Dipartimento di Biologia e Biotecnologie, Sapienza-Università di Roma) Y Yongpeng Zeng (School of Chemistry, Chemical Engineering and Biotechnology, Nanyang Technological University) Q Qin Na (School of Chemistry, Chemical Engineering and Biotechnology, Nanyang Technological University) M Mengya Kong (School of Chemistry, Chemical Engineering and Biotechnology, Nanyang Technological University) B Benjamin Vinod (School of Chemistry, Chemical Engineering and Biotechnology, Nanyang Technological University) M Mui Hoon Nai (Department of Biomedical Engineering, National University of Singapore) B Barbara Hübner (School of Biological Sciences, Nanyang Technological University) A Alexander Ludwig (School of Biological Sciences, Nanyang Technological University) C Chwee Teck Lim (Department of Biomedical Engineering, National University of Singapore) G G. V. Shivashankar (Department of Health Sciences and Technology, ETH Zürich) I Isabella Saggio (Dipartimento di Biologia e Biotecnologie, Sapienza-Università di Roma) W Wenting Zhao (School of Chemistry, Chemical Engineering and Biotechnology, Nanyang Technological University)

Abstract

Chromatin architecture is critical in determining nuclear mechanics. Most studies focus on the mechanical rigidity conferred by chromatin condensation from densely packed heterochromatin, but less is known on how transient chromatin decompaction impinge on nucleus stiffness. Here, we used an array of vertically aligned nanopillars to study nuclear deformability in situ after chromatin decompaction in cells. The nucleus significantly stiffened within 4 h of chromatin decompaction but softened at longer timescales. This acute stiffening of the nucleus was underpinned predominantly by an increase in nucleus volume and nuclear import, and partially by enhanced lamin protein recruitment to the periphery. The coupling between nucleus stiffening and acute chromatin decompaction was observed in low malignancy cancer cell lines (e.g. MCF7, PEO1, A549) but weakened in highly malignant counterparts (e.g. MDA-MB-231, HEYA8, HT1080) due to the capacity to efficiently compact heterochromatin into foci that sustains nucleus deformability required for confined migration. Our work signals how rapid chromatin remodeling is a physiologically relevant pathway to modulate nucleus mechanics and cell migration behavior.

Article Details

Volume / Issue Vol. 122, Issue 19
Published May 13, 2025
ISSN 0027-8424
Publisher National Academy of Sciences

Authors (14)

A

Aninda Mitra

School of Chemistry, Chemical Engineering and Biotechnology, Nanyang Technological University

M

Marie F. A. Cutiongco

School of Chemistry, Chemical Engineering and Biotechnology, Nanyang Technological University

R

Romina Burla

Dipartimento di Biologia e Biotecnologie, Sapienza-Università di Roma

Y

Yongpeng Zeng

School of Chemistry, Chemical Engineering and Biotechnology, Nanyang Technological University

Q

Qin Na

School of Chemistry, Chemical Engineering and Biotechnology, Nanyang Technological University

M

Mengya Kong

School of Chemistry, Chemical Engineering and Biotechnology, Nanyang Technological University

B

Benjamin Vinod

School of Chemistry, Chemical Engineering and Biotechnology, Nanyang Technological University

M

Mui Hoon Nai

Department of Biomedical Engineering, National University of Singapore

B

Barbara Hübner

School of Biological Sciences, Nanyang Technological University

A

Alexander Ludwig

School of Biological Sciences, Nanyang Technological University

C

Chwee Teck Lim

Department of Biomedical Engineering, National University of Singapore

G

G. V. Shivashankar

Department of Health Sciences and Technology, ETH Zürich

I

Isabella Saggio

Dipartimento di Biologia e Biotecnologie, Sapienza-Università di Roma

W

Wenting Zhao

School of Chemistry, Chemical Engineering and Biotechnology, Nanyang Technological University