A two-component system signaling hub controls enterococcal membrane remodeling in response to daptomycin

C Cristina Colomer-Winter (Department of Microbiology and Molecular Medicine, University of Geneva) Z Zeus J. Nair (Singapore-Massachusetts Institute of Technology Alliance for Research and Technology, Antimicrobial Resistance Interdisciplinary Research Group) J Jerome Y. J. Chua (Singapore Centre for Environmental Life Sciences Engineering, Nanyang Technological University) S Soukayna Jabli (Department of Microbiology and Molecular Medicine, University of Geneva) M Mélanie Roch (Department of Microbiology and Molecular Medicine, University of Geneva) A Amaury Cazenave-Gassiot (Singapore Lipidomics Incubator, Life Sciences Institute, National University of Singapore) R Roberto Sierra (Department of Microbiology and Molecular Medicine, University of Geneva) D Diego O. Andrey (Department of Microbiology and Molecular Medicine, University of Geneva) S Shu-Sin Chng K Kimberly A. Kline (Singapore Centre for Environmental Life Sciences Engineering, School of Biological Sciences, Nanyang Technological University)

Abstract

Daptomycin is a last resort antibiotic used to treat vancomycin-resistant enterococcal infections, but daptomycin resistance (DAP R ) arises quickly during treatment. Resistance is due to sequential acquisition of point mutations in the two-component system LiaFSR and in cardiolipin synthases and is associated with alteration of phospholipid and glycolipid membrane composition. The molecular mechanisms underlying these lipid changes are currently unknown. Similarly, it is unclear why mutations in liaFSR occur prior to mutations in cls . We found that Enterococcus faecalis remodels membrane composition as a phenotypic response to daptomycin that parallels the membrane composition of DAP R strains. The enrichment in glycolipids that follows antibiotic exposure is due to LtaS1, the main lipoteichoic acid (LTA) synthase of E. faecalis . LTA production is primarily governed by LiaFSR and SapRS, which directly couples antibiotic sensing with membrane lipid remodeling. Together, our results provide a unifying mechanism that drives phenotypic membrane fortification in a gram-positive pathogen which simultaneously predisposes the cell to acquire genetic high-level daptomycin resistance.

Article Details

Volume / Issue Vol. 123, Issue 17
Published April 28, 2026
ISSN 0027-8424
Publisher National Academy of Sciences

Authors (10)

C

Cristina Colomer-Winter

Department of Microbiology and Molecular Medicine, University of Geneva

Z

Zeus J. Nair

Singapore-Massachusetts Institute of Technology Alliance for Research and Technology, Antimicrobial Resistance Interdisciplinary Research Group

J

Jerome Y. J. Chua

Singapore Centre for Environmental Life Sciences Engineering, Nanyang Technological University

S

Soukayna Jabli

Department of Microbiology and Molecular Medicine, University of Geneva

M

Mélanie Roch

Department of Microbiology and Molecular Medicine, University of Geneva

A

Amaury Cazenave-Gassiot

Singapore Lipidomics Incubator, Life Sciences Institute, National University of Singapore

R

Roberto Sierra

Department of Microbiology and Molecular Medicine, University of Geneva

D

Diego O. Andrey

Department of Microbiology and Molecular Medicine, University of Geneva

S

Shu-Sin Chng

K

Kimberly A. Kline

Singapore Centre for Environmental Life Sciences Engineering, School of Biological Sciences, Nanyang Technological University