A network correspondence toolbox for quantitative evaluation of novel neuroimaging results

R Ru Kong R R. Nathan Spreng (Montreal Neurological Institute, Department of Neurology and Neurosurgery, McGill University) A Aihuiping Xue R Richard F. Betzel (Department of Neuroscience) J Jessica R. Cohen (Department of Psychology and Neuroscience, University of North Carolina at Chapel Hill) J Jessica S. Damoiseaux F Felipe De Brigard S Simon B. Eickhoff A Alex Fornito C Caterina Gratton E Evan M. Gordon A Avram J. Holmes A Angela R. Laird L Linda Larson-Prior L Lisa D. Nickerson A Ana Luísa Pinho A Adeel Razi S Sepideh Sadaghiani (Department of Psychology, University of Illinois at Urbana-Champaign) J James M. Shine A Anastasia Yendiki B B. T. Thomas Yeo L Lucina Q. Uddin

Abstract

Abstract The brain can be decomposed into large-scale functional networks, but the specific spatial topographies of these networks and the names used to describe them vary across studies. Such discordance has hampered interpretation and convergence of research findings across the field. We have developed the Network Correspondence Toolbox (NCT) to permit researchers to examine and report spatial correspondence between their novel neuroimaging results and multiple widely used functional brain atlases. We provide several exemplar demonstrations to illustrate how researchers can use the NCT to report their own findings. The NCT provides a convenient means for computing Dice coefficients with spin test permutations to determine the magnitude and statistical significance of correspondence among user-defined maps and existing atlas labels. The adoption of the NCT will make it easier for network neuroscience researchers to report their findings in a standardized manner, thus aiding reproducibility and facilitating comparisons between studies to produce interdisciplinary insights.

Article Details

Volume / Issue Vol. 16, Issue 1
Published March 25, 2025
ISSN 2041-1723
Publisher Nature Portfolio

Journal Info

Nature Communications

Nature Portfolio

ISSN: 2041-1723 Open Access Life Sciences

Authors (22)

R

Ru Kong

R

R. Nathan Spreng

Montreal Neurological Institute, Department of Neurology and Neurosurgery, McGill University

A

Aihuiping Xue

R

Richard F. Betzel

Department of Neuroscience

J

Jessica R. Cohen

Department of Psychology and Neuroscience, University of North Carolina at Chapel Hill

J

Jessica S. Damoiseaux

F

Felipe De Brigard

S

Simon B. Eickhoff

A

Alex Fornito

C

Caterina Gratton

E

Evan M. Gordon

A

Avram J. Holmes

A

Angela R. Laird

L

Linda Larson-Prior

L

Lisa D. Nickerson

A

Ana Luísa Pinho

A

Adeel Razi

S

Sepideh Sadaghiani

Department of Psychology, University of Illinois at Urbana-Champaign

J

James M. Shine

A

Anastasia Yendiki

B

B. T. Thomas Yeo

L

Lucina Q. Uddin