TBpore cluster: A novel phylogenetic pipeline for tuberculosis transmission studies using nanopore next-generation sequencing data - Sophie Gagnon; Emmanuelle Ametepe; Floriane Point; William Cloutier Charette; Arpita Chakravarti; Paul Rivest; Pierre-Marie Akochy; Hafid Soualhine; Zamin Iqbal; Michael B. Hall; Simon Grandjean Lapierre (PLoS ONE, 2025)